KEGG   Vibrio japonicus: NP165_10930
Entry
NP165_10930       CDS       T08510                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vjp  Vibrio japonicus
Pathway
vjp00010  Glycolysis / Gluconeogenesis
vjp00020  Citrate cycle (TCA cycle)
vjp00260  Glycine, serine and threonine metabolism
vjp00280  Valine, leucine and isoleucine degradation
vjp00310  Lysine degradation
vjp00380  Tryptophan metabolism
vjp00620  Pyruvate metabolism
vjp00630  Glyoxylate and dicarboxylate metabolism
vjp00640  Propanoate metabolism
vjp00670  One carbon pool by folate
vjp00785  Lipoic acid metabolism
vjp01100  Metabolic pathways
vjp01110  Biosynthesis of secondary metabolites
vjp01120  Microbial metabolism in diverse environments
vjp01200  Carbon metabolism
vjp01210  2-Oxocarboxylic acid metabolism
vjp01240  Biosynthesis of cofactors
Module
vjp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vjp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vjp_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
vjp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
vjp_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vjp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NP165_10930 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NP165_10930 (lpdA)
   00620 Pyruvate metabolism
    NP165_10930 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NP165_10930 (lpdA)
   00640 Propanoate metabolism
    NP165_10930 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NP165_10930 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NP165_10930 (lpdA)
   00310 Lysine degradation
    NP165_10930 (lpdA)
   00380 Tryptophan metabolism
    NP165_10930 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NP165_10930 (lpdA)
   00670 One carbon pool by folate
    NP165_10930 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vjp04147]
    NP165_10930 (lpdA)
Enzymes [BR:vjp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NP165_10930 (lpdA)
Exosome [BR:vjp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NP165_10930 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 GIDA FAD_binding_2 AlaDh_PNT_C HI0933_like NAD_binding_8 FAD_binding_3 Thi4 DAO
Other DBs
NCBI-ProteinID: UUM30208
LinkDB
Position
1:complement(2338919..2340349)
AA seq 476 aa
MSKEIKAQVVVLGSGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVS
KVIEEAKAMADHGVVFGEPQTDINKIRIWKEKVVNQLTGGLSGMAKMRNVTVVSGYGKFT
GPNSILVEGEGESTVVNFENAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPEKLLI
MGGGIIGLEMGTVYHSLGSKVEVVEMFDQVIPAADKDIVKVYTKRIKDKFKLMLETKVTA
VEAKEDGIYVSMEGKKAPAEAERYDAVLVAIGRVPNGKLIDGEKAGLEIDERGFINVDKQ
MRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKEEGIKYEVATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNKKAVKKKK
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgagcaaagaaattaaagcccaagttgttgtacttggttctggtcctgctggttactcc
gctgccttccgttgtgcagacttaggtcttgaaactgtacttgttgaacgttacagcact
ctaggtggtgtgtgtctgaacgtgggttgtatcccatctaaagcacttctacacgtttct
aaagttatcgaagaagcgaaagcgatggctgatcacggcgttgtattcggcgagccgcaa
acagacatcaacaagatccgtatctggaaagaaaaagttgttaaccaactaactggcggc
ctaagtggcatggctaagatgcgtaacgtgactgttgttagcggttacggtaagtttact
ggtcctaactctatccttgttgaaggtgaaggtgagtcaacagttgtaaactttgaaaac
gcgatcgttgcagctggttctcgtccaatcaaactgccatttatcccgcatgaagaccca
cgtatttgggactctactgacgctcttgaactgaaagaagtgccagaaaaactgcttatc
atgggtggtggtatcatcggtctagaaatgggtacggtttaccactctctaggttctaaa
gttgaagttgttgagatgtttgaccaggtaattcctgcggcagacaaagatatcgttaag
gtttacaccaagcgtatcaaagacaagttcaagctaatgctagaaacgaaagtaacagca
gttgaagcgaaagaagacggtatctacgtttcaatggaaggcaagaaagcacctgcagaa
gcagagcgctacgatgctgttctagttgctatcggtcgtgtaccaaacggtaagctaatc
gacggtgaaaaagcgggtctagaaatcgacgagcgcggcttcatcaacgttgataagcaa
atgcgtactaacgttcctcacatcttcgctatcggtgacatcgttggccaaccaatgctt
gctcacaaaggtgtgcacgaaggtcacgtagctgctgaagttatctctggtaagaagcac
tacttcgaccctaaagttattccttcaatcgcgtacactgagccagaagtggcttgggtt
ggtaagactgagaaagaagcgaaagaagaaggcatcaagtacgaagtggcaacattcccg
tgggcagcatcaggtcgtgcaatcgcatctgactgtgcagacggtatgactaagctaatc
ttcgacaaagaaactcatcgcgtaatcggtggtgctatcgttggtactaacggtggtgaa
ctactaggtgaaatcggtctagcgatcgagatgggttgtgatgcagaagatattgctctg
actatccacgctcacccaactctacacgagtctgtaggtctagctgctgaagtatttgaa
ggttcaatcactgaccttccaaacaaaaaagcagttaagaagaaaaagtaa

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