Vibrio japonicus: NP165_10930
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Entry
NP165_10930 CDS
T08510
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vjp
Vibrio japonicus
Pathway
vjp00010
Glycolysis / Gluconeogenesis
vjp00020
Citrate cycle (TCA cycle)
vjp00260
Glycine, serine and threonine metabolism
vjp00280
Valine, leucine and isoleucine degradation
vjp00310
Lysine degradation
vjp00380
Tryptophan metabolism
vjp00620
Pyruvate metabolism
vjp00630
Glyoxylate and dicarboxylate metabolism
vjp00640
Propanoate metabolism
vjp00670
One carbon pool by folate
vjp00785
Lipoic acid metabolism
vjp01100
Metabolic pathways
vjp01110
Biosynthesis of secondary metabolites
vjp01120
Microbial metabolism in diverse environments
vjp01200
Carbon metabolism
vjp01210
2-Oxocarboxylic acid metabolism
vjp01240
Biosynthesis of cofactors
Module
vjp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vjp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vjp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
vjp_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
vjp_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NP165_10930 (lpdA)
00020 Citrate cycle (TCA cycle)
NP165_10930 (lpdA)
00620 Pyruvate metabolism
NP165_10930 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
NP165_10930 (lpdA)
00640 Propanoate metabolism
NP165_10930 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NP165_10930 (lpdA)
00280 Valine, leucine and isoleucine degradation
NP165_10930 (lpdA)
00310 Lysine degradation
NP165_10930 (lpdA)
00380 Tryptophan metabolism
NP165_10930 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NP165_10930 (lpdA)
00670 One carbon pool by folate
NP165_10930 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vjp04147
]
NP165_10930 (lpdA)
Enzymes [BR:
vjp01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NP165_10930 (lpdA)
Exosome [BR:
vjp04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NP165_10930 (lpdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
FAD_binding_2
AlaDh_PNT_C
HI0933_like
NAD_binding_8
FAD_binding_3
Thi4
DAO
Motif
Other DBs
NCBI-ProteinID:
UUM30208
LinkDB
All DBs
Position
1:complement(2338919..2340349)
Genome browser
AA seq
476 aa
AA seq
DB search
MSKEIKAQVVVLGSGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVS
KVIEEAKAMADHGVVFGEPQTDINKIRIWKEKVVNQLTGGLSGMAKMRNVTVVSGYGKFT
GPNSILVEGEGESTVVNFENAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPEKLLI
MGGGIIGLEMGTVYHSLGSKVEVVEMFDQVIPAADKDIVKVYTKRIKDKFKLMLETKVTA
VEAKEDGIYVSMEGKKAPAEAERYDAVLVAIGRVPNGKLIDGEKAGLEIDERGFINVDKQ
MRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKEEGIKYEVATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNKKAVKKKK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaattaaagcccaagttgttgtacttggttctggtcctgctggttactcc
gctgccttccgttgtgcagacttaggtcttgaaactgtacttgttgaacgttacagcact
ctaggtggtgtgtgtctgaacgtgggttgtatcccatctaaagcacttctacacgtttct
aaagttatcgaagaagcgaaagcgatggctgatcacggcgttgtattcggcgagccgcaa
acagacatcaacaagatccgtatctggaaagaaaaagttgttaaccaactaactggcggc
ctaagtggcatggctaagatgcgtaacgtgactgttgttagcggttacggtaagtttact
ggtcctaactctatccttgttgaaggtgaaggtgagtcaacagttgtaaactttgaaaac
gcgatcgttgcagctggttctcgtccaatcaaactgccatttatcccgcatgaagaccca
cgtatttgggactctactgacgctcttgaactgaaagaagtgccagaaaaactgcttatc
atgggtggtggtatcatcggtctagaaatgggtacggtttaccactctctaggttctaaa
gttgaagttgttgagatgtttgaccaggtaattcctgcggcagacaaagatatcgttaag
gtttacaccaagcgtatcaaagacaagttcaagctaatgctagaaacgaaagtaacagca
gttgaagcgaaagaagacggtatctacgtttcaatggaaggcaagaaagcacctgcagaa
gcagagcgctacgatgctgttctagttgctatcggtcgtgtaccaaacggtaagctaatc
gacggtgaaaaagcgggtctagaaatcgacgagcgcggcttcatcaacgttgataagcaa
atgcgtactaacgttcctcacatcttcgctatcggtgacatcgttggccaaccaatgctt
gctcacaaaggtgtgcacgaaggtcacgtagctgctgaagttatctctggtaagaagcac
tacttcgaccctaaagttattccttcaatcgcgtacactgagccagaagtggcttgggtt
ggtaagactgagaaagaagcgaaagaagaaggcatcaagtacgaagtggcaacattcccg
tgggcagcatcaggtcgtgcaatcgcatctgactgtgcagacggtatgactaagctaatc
ttcgacaaagaaactcatcgcgtaatcggtggtgctatcgttggtactaacggtggtgaa
ctactaggtgaaatcggtctagcgatcgagatgggttgtgatgcagaagatattgctctg
actatccacgctcacccaactctacacgagtctgtaggtctagctgctgaagtatttgaa
ggttcaatcactgaccttccaaacaaaaaagcagttaagaagaaaaagtaa
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