Vibrio japonicus: NP165_12380
Help
Entry
NP165_12380 CDS
T08510
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
vjp
Vibrio japonicus
Pathway
vjp00541
Biosynthesis of various nucleotide sugars
vjp01100
Metabolic pathways
vjp01250
Biosynthesis of nucleotide sugars
Module
vjp_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NP165_12380 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vjp01005
]
NP165_12380 (kdsB)
Enzymes [BR:
vjp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
NP165_12380 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
vjp01005
]
Lipid A
NP165_12380 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
UUM30463
LinkDB
All DBs
Position
1:complement(2608957..2609709)
Genome browser
AA seq
250 aa
AA seq
DB search
MSKIRVVIPSRYGSSRLEGKPLLEILNKPVFWHVYQRCCEAGFHHDDIVLATDDMRIFQK
ASELGLNVVMTSSNHDSGTDRIFEVATLLDWNDQDIVINVQGDEPLIDPVLIRQVGDFAK
NRNEFDIVTAVTSIDSLNDFQNPNIVKAILGLNNLALYFSRSPTPYNRDLPSCTDLAFRH
IGIYAYSIEVLSKFCSFGEAPLEAYEKLEQLRAISNGLRIGACHYHGELSHGVDTLPDYL
AIKTEMEQNK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaattcgagttgtaataccaagtagatatggttcttcgcgattagagggcaag
cctttattggagatactgaacaagccggtattttggcatgtttatcagcgttgttgtgag
gccgggttccatcatgatgatatcgttttagctacagatgatatgcgaatttttcaaaaa
gcatcagagttaggcttgaatgtagtaatgacatcatccaatcacgatagtggtacagat
cgaatttttgaagttgctacattacttgactggaatgaccaagatatcgtgattaatgtt
caaggtgacgagcctttaattgatcctgtacttatccgtcaagtaggcgattttgccaaa
aatagaaatgagtttgatatcgttaccgcggttacttctatcgattctttaaatgatttc
cagaaccctaatattgtcaaagctatacttggtttaaataatttagcgctttatttttct
cgtagtcccacaccctataatcgtgacttacctagttgtactgaccttgcatttaggcat
atcggaatctatgcctacagcatcgaagtgctatccaagttctgttcttttggcgaagca
ccattagaagcatatgaaaagttggaacaacttcgtgcgatatcaaacggacttagaatt
ggggcgtgtcattatcatggtgagctatcgcatggagtggatacattgcccgactaccta
gctattaaaactgagatggaacaaaataaatga
DBGET
integrated database retrieval system
