Vibrio japonicus: NP165_12385
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Entry
NP165_12385 CDS
T08510
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vjp
Vibrio japonicus
Pathway
vjp00541
Biosynthesis of various nucleotide sugars
vjp01100
Metabolic pathways
vjp01250
Biosynthesis of nucleotide sugars
Module
vjp_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NP165_12385 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vjp01005
]
NP165_12385 (kdsA)
Enzymes [BR:
vjp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NP165_12385 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
vjp01005
]
Lipid A
NP165_12385 (kdsA)
BRITE hierarchy
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GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
UUM30464
UniProt:
A0ABY5LEN9
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All DBs
Position
1:complement(2609783..2610580)
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AA seq
265 aa
AA seq
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MFLIAGPCVIESENLVVDTFGHLKEITEKLGIEYIAKSSFIKANRSSASAFTGLGVERGL
KILQKAKLQLGVRVITDVHEDTPLDEVASVVDVLQTPAFLVRQTNFIQKVASMGKPVNIK
KGQWMHPADMVPVVEKCRAVGNDDIWLCDRGTSFGFGQLINYMPGLTIMREATGCKVVMD
ATHSVQMPGILNGSTGGNRYHVPAIARAAVAVGVDGLFMETHPDPDNALCDGPNMLPLKH
MEELLETLLEINEVVNRKERIETKF
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgattgcagggccgtgtgttattgagtccgaaaacttagttgttgatactttt
ggccatctcaaggaaattacagaaaagttgggtattgagtatattgctaaatcgtcgttt
attaaggcgaatcgctcttcagcaagtgctttcacagggcttggtgttgaacgtggtttg
aaaattttacagaaagcaaaactgcaattaggcgttcgagttattactgatgtccatgaa
gatacccctcttgatgaagttgcttctgtcgttgacgtattgcaaacccctgcatttctt
gttcgtcagactaattttatccaaaaagttgcttctatgggaaagcctgtcaatataaaa
aaaggacaatggatgcaccctgccgacatggttcctgtggttgaaaaatgtcgagcagtc
ggtaatgatgatatctggttgtgtgatcgtggcactagctttggctttggtcagctaatt
aattatatgcctggacttaccataatgagggaagcaaccggctgtaaagttgtgatggac
gcaactcatagcgttcaaatgcccggcattttaaatggttctacaggtggtaaccgatat
catgtaccagctatcgctcgtgccgctgttgcggtaggcgttgacggtctcttcatggaa
acgcatccagatcctgacaacgcactctgtgatggtcctaacatgctgccactcaaacac
atggaagagctgttagagactttactggaaataaacgaagtagtaaacagaaaagaacgt
attgagactaagttctag
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