Vibrio japonicus: NP165_12480
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Entry
NP165_12480 CDS
T08510
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
vjp
Vibrio japonicus
Pathway
vjp00540
Lipopolysaccharide biosynthesis
vjp01100
Metabolic pathways
Module
vjp_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NP165_12480 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vjp01005
]
NP165_12480 (waaA)
Enzymes [BR:
vjp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
NP165_12480 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
NP165_12480 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
NP165_12480 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
NP165_12480 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
vjp01005
]
Lipid A
NP165_12480 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
DNMK
Motif
Other DBs
NCBI-ProteinID:
UUM30482
LinkDB
All DBs
Position
1:complement(2628861..2630150)
Genome browser
AA seq
429 aa
AA seq
DB search
MKMLVRYCYTLLLALVSPVLLWGLYRSRPNKPSFGSRWREHFGITPELESHRSGVIWLHA
VSVGEVLASRKLISQLQERYPEKAVLVTTTTSTGAQQVENMGNGIVHRYMPIDFSWCVRR
FLRTVKPEIMLIIETEIWPNTIHTVSKQSIPIVLVNGRLSEKSLSNYQKLSLLIQPALSS
ISSLLSVHSDDAKRFIGLGVEAEKVTTTGSLKYDISVEQQTYDDASALRKQLGESRKVWI
AASTHLGEDEFILAAYKLAKEKIPDLLLILVPRHPERFDSVAELIQSQGLSCVRRSQGRA
TELSKSTDVYLGDSMGEMMILLAASDLVFMGGSLLGKKVGGHNFIEPAVLSKPCLTGPSY
YNFADLADQLIGVGMLTVVSDSEQLAEKVVKSLSSPETLSASGKAGYDIVLRNQGALKRT
VNSIASFIH
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcttgtacgttactgttacaccttattgttagccttggtaagccccgtcttg
ttatggggcttataccgttctaggccaaataaaccgagttttggctctcgatggagagag
catttcggtatcacaccagagctagaatcgcaccgttctggggttatttggcttcatgct
gtgtcagttggagaagtattggcaagtcgaaaattgatttctcagcttcaagaacgttac
ccggaaaaagcagtactggtaacgacgacgacgagtaccggcgcacagcaagtagaaaat
atgggtaatggaatcgtgcatcgttatatgccgatcgactttagttggtgtgttcgtcgt
tttcttcggacggttaaaccagaaatcatgttgattattgaaacagagatctggccaaac
acaattcataccgtatccaagcaaagtataccgatcgtgctggtcaatgggcgattatct
gaaaagtcgctttccaactaccaaaaactgagtttgttgattcaacctgccctaagtagc
atttcttcgcttttatcagttcatagtgatgatgctaaacgttttatcgggttaggcgtg
gaggctgaaaaagtaaccacaacgggctcgctaaaatatgatatctctgtcgagcagcag
acttatgatgacgcgagtgctttacgcaagcagctaggcgagagcagaaaagtttggatc
gcagcgagtacccatctaggagaagatgaattcatccttgccgcttacaaactagcaaaa
gaaaaaatcccagacttattacttatcttggtaccgcgtcatcctgagcgttttgatagc
gtggccgagttgatccaaagtcaaggcttatcctgtgttaggaggagccaggggagagcc
actgaactatcgaaaagcacagatgtgtatttaggtgatagcatgggcgagatgatgatt
ttgctcgcagcttccgatttagtgtttatgggaggtagcctattgggtaaaaaagtcggt
ggtcacaactttattgagccggctgtactttccaaaccctgtttgactggcccgagttac
tacaactttgctgacctagcggatcagttgataggagttggaatgctaaccgttgtttct
gatagtgagcaattagcagaaaaagtcgtcaaaagcctttcatctccagagactttatct
gcaagtggtaaagcgggatatgatatagtattgcgcaatcaaggtgcgttaaaacgtaca
gtcaattcaatcgcttcctttattcactga
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