Vibrio japonicus: NP165_13125
Help
Entry
NP165_13125 CDS
T08510
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vjp
Vibrio japonicus
Pathway
vjp00071
Fatty acid degradation
vjp00280
Valine, leucine and isoleucine degradation
vjp00310
Lysine degradation
vjp00362
Benzoate degradation
vjp00380
Tryptophan metabolism
vjp00410
beta-Alanine metabolism
vjp00640
Propanoate metabolism
vjp00650
Butanoate metabolism
vjp00907
Pinene, camphor and geraniol degradation
vjp00930
Caprolactam degradation
vjp01100
Metabolic pathways
vjp01110
Biosynthesis of secondary metabolites
vjp01120
Microbial metabolism in diverse environments
vjp01200
Carbon metabolism
vjp01212
Fatty acid metabolism
Module
vjp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NP165_13125 (fadB)
00650 Butanoate metabolism
NP165_13125 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NP165_13125 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NP165_13125 (fadB)
00310 Lysine degradation
NP165_13125 (fadB)
00380 Tryptophan metabolism
NP165_13125 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NP165_13125 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NP165_13125 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NP165_13125 (fadB)
00930 Caprolactam degradation
NP165_13125 (fadB)
Enzymes [BR:
vjp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NP165_13125 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NP165_13125 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NP165_13125 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NP165_13125 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
Motif
Other DBs
NCBI-ProteinID:
UUM30589
LinkDB
All DBs
Position
1:2755590..2757761
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQANNLTVRELQDGIAELSFCSPNSVNKLDLATLESLDKALDALHNHKGLKGLLLTSD
KDSFIVGADITEFLGLFAKTEAELDTWLKFANSIFNKLEDLPVPTVSVLKGHTLGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVVGADNAMEIITQGKACRADEALK
LGLLDAVVESDSLYESALTTLTQAINEKLDWQERRKQKTSPLTLSKLESMMSFTMAKGLV
AQKAGPHYPAPMTAVNTIEEGARFARNEALDIERKYFIKLAKSEEAKALVSLFLNDQYIK
GIAKKAAKSANKGTERAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQASLDLGMTEASKL
LNKQLERGRIDGFKMAGILASITPSLHYAGIENSDVIVEAVVENPKVKAAVLSEVEQQVG
QNTVITSNTSTIPINQLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSEETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTQIDKVMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAEGFPERMRKQGPDAINALFEANKYGQKNGSGFYNYVIDRKGK
PKKTYSEEILPVLADVCADKRDFDEETIIQRMMIPMINEVVLCLQEKIIASPQEADMALV
YGLGFPPFRGGVFHYLDSVGIAEFIEMAKQYEDLGAMYRVPQMLIDMAAKGETFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagctaacaaccttacggtaagggaactacaagacggaattgcagagctc
agcttttgctcccctaactccgtcaataaactggacctagccacgctagagtctctagat
aaagcactagatgcccttcacaaccacaaaggtttgaaagggctattgctaacctctgat
aaagattcgtttatcgtaggtgccgatattaccgagttcttaggattatttgctaagaca
gaagcggaactggatacttggcttaaatttgccaatagcatcttcaataaacttgaggac
ctacctgtaccaaccgtttctgttctcaaaggccacactcttggcggaggctgcgagtgt
gttctcgctaccgatatgcgcatcggtgataaaaccaccagcatcggtcttccagaaact
aagttgggcatcatgcctgggtttggcggttgtgtgcgtttaccacgcgtggttggtgca
gataacgcaatggaaatcatcacccaaggtaaagcttgccgtgcagatgaagctttaaag
cttggcctactggatgctgttgttgagtctgactctctatatgaatcagcgctaacaaca
cttacccaggcaatcaatgaaaagctagactggcaagaacgtcgtaagcaaaagacatca
ccattgaccttgagtaagcttgagtcgatgatgagtttcactatggcgaaaggcttagtg
gcacaaaaagctggcccacactaccctgcgccaatgacggcagtgaacaccatcgaagaa
ggggctcgctttgcccgtaacgaagcgctagacattgaacgcaagtatttcatcaagctg
gctaagtctgaggaagccaaagcattagtcagcttattcctaaatgatcaatacatcaaa
ggcattgcgaaaaaagcagcaaagtcagccaataaaggcactgagcgcgcagcagtacta
ggtgctggcattatgggtggcggcattgcataccagtcagcactcaaaggtgtgcctgtc
ttaatgaaagacattgctcaagcatccctagatttggggatgaccgaagcgtcgaaactg
ctcaataagcagttagagcgtggtcgcatcgacggcttcaaaatggcaggtattcttgct
tctatcacaccgagtttgcattacgctggcatcgaaaactctgacgttattgttgaagca
gtagtcgaaaatccaaaagtaaaagccgctgtgttaagtgaagtagaacagcaggtcggc
caaaatacggtcatcacatcaaacacctctacgattccaatcaaccaactggcgaagtca
ctgaaacgcccagaaaacttctgtggtatgcacttcttcaacccagttcatcgcatgcca
ttggttgagattattcgtggcgagcacacgtcagaggaaaccatcaaccgagttgttgct
tacgcagcgaaaatgggcaagtcaccgattgtcgttaatgactgcccagggttcttcgta
aaccgcgtattgttcccatactttggtggttttagcatgctactgcgtgatggggcagac
tttactcaaatagataaagttatggagcgcaagtttggctggccaatgggccctgcgtac
cttcttgacgttgtgggtatcgataccgctcaccatgcacaagccgtaatggcagaaggt
ttccctgaacgtatgcgtaaacaaggtcctgatgcaattaatgctctatttgaagcgaac
aagtacggtcagaagaatggtagcggcttctataattatgtcatcgatagaaaaggcaag
ccgaagaagacctactcagaagagattttgccggtattggcagacgtatgcgcagataag
cgagacttcgacgaagagactatcattcaacgcatgatgattccgatgatcaacgaagtg
gtactgtgtctgcaagagaagatcattgcttctcctcaagaagctgatatggcgttggta
tacggattgggcttccctccattccgcggtggtgtattccactacctagatagcgtgggc
attgctgaatttattgaaatggcgaaacagtatgaggatctgggtgcgatgtaccgcgtt
ccacaaatgcttatcgatatggcggccaaaggtgaaaccttttatggcgcacaacagcaa
ggttctatctaa
DBGET
integrated database retrieval system
