Vibrio japonicus: NP165_13600
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Entry
NP165_13600 CDS
T08510
Name
(GenBank) GGDEF and EAL domain-containing protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vjp
Vibrio japonicus
Pathway
vjp05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
NP165_13600
Enzymes [BR:
vjp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
NP165_13600
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
UUM32602
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Position
2:68121..70013
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AA seq
630 aa
AA seq
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MSKLNTADICIPHEMLDSWQIIANLLAETVSVPAALIMRIHEEHIEVFTANNNVAHPYHP
GEKEPLNQRLYCETVIETGQKLHIPNAIIDPEWKNNPDAELGFIAYYGLPIYWPNGEPFG
TICVLDKKENHFLQTYQVLLESFRDTIEAQLKTLYQNKRLQQLNTALKSRIQTRTQDLVE
LNYSLNIEMDKRRAAEQKIVFQQNHDLATGFLNRAALESESKILLRSTTDQNEKHVALLH
VGFANGRRIQSKYGYSAWDEVLIEYRQRLGDLSAYDIVTARPTSTDLAFLLYSNNLDEDI
QQLCDHLVETSHSEFSVEGEQLHLHSFIGIATSKDTISSSKLSKFAFEAMLSCKDSGHKF
SFYSQDLSDIHKHLNQLESYLLQAIRNDDLLLYFQPKVSPVTHKWIGAEALLRWRHPVLG
DISNEPLIHLAEQNGLIFELGNFVLRSAIEKASEWVGKVDNFKLGVNISAVQLQSPHFVD
QVQNLLTTYQLPAQFLELEVTETGLIADEQIAQKTLTSLSQLGVTLSLDDFGTGYASFNY
LKKFPFDAIKVDKSFINQLEDNEEDQEIVRSIINIAKKLGYRVTAEGVETQKHEAFIVAE
GCDAGQGYLYGKPMPCDEFEASLMLKRTDV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaactgaacactgccgatatctgtattccacacgaaatgcttgatagttggcag
atcattgcgaacctattggcagagacagtgtctgtgcctgctgcattgatcatgcgtatt
cacgaagaacacattgaagtctttaccgccaataacaatgtggctcatccctaccaccct
ggagagaaagaaccgcttaatcaaaggttatactgtgaaacagtcatagagacgggtcaa
aaactccacatccccaatgcaatcatcgacccagaatggaaaaataaccccgacgctgag
ttgggctttatagcctattacggattgccgatctattggccaaatggtgagccttttggc
acgatctgtgtcttggacaaaaaagaaaatcatttcttacagacctatcaagtactgtta
gagtctttccgcgacaccatagaagcgcagttgaaaacactgtatcaaaacaagcgtttg
caacagttaaataccgcactcaagtcgagaattcaaacacgtacacaagatcttgttgaa
ctgaactactcacttaacattgaaatggacaaacggcgcgctgctgagcagaaaattgtt
tttcagcagaaccatgatttggccacggggtttttaaatcgggctgccctcgaaagcgaa
tccaaaatactgctaagaagtacgacagaccaaaatgagaaacacgttgcgctcttgcat
gtgggatttgcgaatggccggcgcattcagtcaaaatatggttatagcgcttgggatgag
gtactgattgaataccggcaaagactcggagatttaagcgcatacgacattgtcactgcc
agacccacctccactgacctcgcctttcttctgtattccaacaaccttgatgaagacatt
cagcagctttgcgatcacttagtggaaaccagccactccgaattttcagttgaaggtgag
caactccacctacacagttttattggtatcgcgacctctaaagacaccatcagtagcagt
aaactatcaaagttcgcctttgaagccatgctttcttgcaaagactcgggacataaattt
agcttctactcacaagatttatcagacatccacaagcacctcaaccagttagaaagttac
cttttacaagcaataagaaacgatgatctgctgctctatttccagcctaaagtttcgcct
gttacgcacaaatggatcggtgcagaagccttactccgttggagacaccccgttttaggc
gatatttctaacgaaccgcttattcaccttgcagaacaaaatggacttatctttgaactg
ggtaattttgtcctgcgctctgctattgaaaaagccagtgagtgggtaggaaaagtcgat
aactttaaactgggtgtaaacatttcggcagtgcaactccaaagccctcactttgtcgac
caagtacaaaaccttctgaccacttatcagttgcccgctcaatttctagagctggaagtg
acagaaacggggctaattgccgatgaacaaatcgcacaaaagacattaacctcgttaagc
caacttggcgtgacattgtcactagatgacttcggaactggctatgcctcttttaattac
ctcaaaaaatttcccttcgacgcaattaaagtcgacaaaagctttattaatcagctggaa
gataatgaggaagatcaggaaatcgttcgctccatcatcaatatcgcgaaaaaacttggc
tacagagtgacagcagaaggtgtagagacacaaaagcatgaagcattcatcgtcgcagaa
ggttgcgatgctgggcaaggttacttatatggcaagcccatgccctgtgatgaatttgaa
gccagtttaatgcttaaacgcactgatgtttaa
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