Vibrio japonicus: NP165_13720
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Entry
NP165_13720 CDS
T08510
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
vjp
Vibrio japonicus
Pathway
vjp00230
Purine metabolism
vjp00240
Pyrimidine metabolism
vjp01100
Metabolic pathways
vjp01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
NP165_13720 (nrdD)
00240 Pyrimidine metabolism
NP165_13720 (nrdD)
Enzymes [BR:
vjp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
NP165_13720 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
DUF7130
Zn_Tnp_IS91
DUF7129
Motif
Other DBs
NCBI-ProteinID:
UUM32625
UniProt:
A0ABY5LNV9
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All DBs
Position
2:complement(92419..94539)
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AA seq
706 aa
AA seq
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MKPIVIKRDGSRAPFSRDRIQSAVEAAAEHVDKEIAIYALNVALAVELQLKDHDEVHIAE
IQTLVENELMQGPFKSLARSYIEYRHDRDIAREKQSVLTREIEGLIEESNVDLINENANK
DGKVIPTQRDLLAGIVAKHYAKTHILPRDIVQAHEHGDIHYHDLDYAPFFPMFNCMLIDL
KGMLTHGFKMGNAEIDTPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLQPYVMASY
EKHLSVAKEWDIRDPEGFARNRTEKECFDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTT
WASRLIQQSILKNRIAGLGKNSKTAVFPKLVFGIKDGLNHKAGDPNYDIKKLALECASKR
MYPDILNYDKVVEVTGSFKTPMGCRSFLSTYEENGELIHEGRNNLGVVSLNLPRIALRAG
GDEAKFYELLDEKLKIARRALETRISRLENVKARVAPILYMEGACGTRLKADEPIANIFK
NGRASISLGYIGVHETINALFGAETHLYDDSELRNKAIAIIKHLKEAVNRWSEESGYGYS
LYGTPSENLCSRFCRIDTKEFGVVEGVTDKGYYTNSFHLDVEKKVNPYDKIDFEMPYPEI
SSGGFICYGEFPNMQRNIEALENVWDYSYTRVPYYGTNTPIDECYECGYMGEFECTSKGF
TCPSCGNHDSTKVSVTRRVCGYLGSPDARPFNFGKQEEVKRRVKHL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccaatcgtaatcaagcgcgacggctcaagggctccgtttagtagagatcgcatt
caatccgcagtggaagctgctgcagaacatgtcgataaagagatcgcgatatatgcactt
aatgtcgccttagcggtcgaactgcagctaaaagatcacgatgaagtccatatcgccgaa
atccaaacgctggtggaaaatgaattgatgcaagggccatttaaatcgcttgcacgttcg
tacattgagtaccgtcatgatcgtgatattgcacgcgagaagcagagcgtgcttacgcgt
gaaatcgaagggttgattgaggaaagcaacgttgatctgatcaacgaaaatgccaacaaa
gacgggaaggtgattccgacgcagcgtgatttactcgcaggtatagtggcgaaacactac
gctaaaactcacattcttccacgagatattgttcaagctcatgagcacggcgacatccat
taccacgatctagactacgcaccttttttcccaatgtttaactgtatgttgatcgattta
aaaggcatgctgacgcacggctttaagatgggcaatgcagaaatagacacgcctaagtcc
atttctaccgccaccgccgtcactgcccaaatcatcgcacaggtcgcaagccacatttat
ggtggaaccaccatcaaccgaattgatgaagtgctacagccttacgtaatggcaagctat
gagaaacatcttagtgttgccaaagagtgggacatccgcgatccagaagggtttgctcga
aatcgcaccgagaaagagtgctttgatgccttccagtcgcttgaatatgaggtaaacaca
ctgcacaccgctaatgggcaaacgccgtttgtaacgtttggttttggtttagggacaact
tgggcatctcgcctgattcaacaatccatactgaaaaaccgaattgcgggattgggcaag
aacagcaaaactgcggtattccctaaattagtctttggcattaaagatggcttaaatcac
aaagctggcgatccaaactacgacattaaaaaactggccttggagtgcgcgtctaaacgc
atgtacccagacattctgaactacgacaaagtggttgaagtgacaggatcgtttaaaacg
ccaatgggttgtcgtagcttcctgagcacttatgaagagaatggcgagcttattcacgaa
ggtcgtaacaacttgggtgtggtcagcttgaatttgcctaggattgcgcttcgagcaggt
ggcgatgaagcgaaattctacgagttactggatgaaaaactaaaaattgcccgtcgtgcg
ctagagacacgtatctcacgccttgaaaacgtaaaagcgcgtgtcgctccaatactctat
atggaaggtgcgtgtggtactcgcctaaaagcggacgagccaatcgcgaatatttttaag
aatggtcgtgcgtctatctctttgggctacattggcgtacatgaaacgatcaatgcattg
ttcggtgcagaaactcacctatacgatgacagtgagttacgtaataaagcaatcgcaatc
atcaaacaccttaaagaagcggtcaaccgctggagcgaagaatctgggtacggctacagc
ctgtatgggacgccgagtgaaaacttgtgcagccgtttctgccgtattgataccaaagag
tttggcgtagtagagggagtgacagacaaaggctattacacaaacagcttccatttggat
gtagagaagaaggttaacccatacgacaaaattgacttcgagatgccttacccagaaatc
tccagcggtgggttcatctgttatggtgagtttccgaatatgcagagaaacattgaagcg
ctagagaacgtctgggattacagctacacccgagtaccctattacggaacaaacacgccg
atcgatgaatgttacgaatgcggctacatgggtgagtttgaatgtaccagcaaaggtttc
acttgcccgagttgcggaaaccatgattctaccaaagtgtcggtaacacgccgcgtatgt
ggttacttaggtagtccagacgcacgtccgtttaactttggtaaacaagaagaagtgaaa
cgtcgagtgaaacacctatag
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