KEGG   Vibrio japonicus: NP165_14115
Entry
NP165_14115       CDS       T08510                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vjp  Vibrio japonicus
Pathway
vjp03030  DNA replication
vjp03430  Mismatch repair
vjp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vjp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NP165_14115
   03430 Mismatch repair
    NP165_14115
   03440 Homologous recombination
    NP165_14115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vjp03032]
    NP165_14115
   03400 DNA repair and recombination proteins [BR:vjp03400]
    NP165_14115
Enzymes [BR:vjp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NP165_14115
DNA replication proteins [BR:vjp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NP165_14115
DNA repair and recombination proteins [BR:vjp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NP165_14115
SSDB
Motif
Pfam: RNase_T RNase_H_2 CAF1
Other DBs
NCBI-ProteinID: UUM32699
UniProt: A0ABY5LKU5
LinkDB
Position
2:189382..190101
AA seq 239 aa
MFNKLMSAPSIDWPAKFKRKSENARDERLKTYFSQDLPVATTPLEDITFLAMDFETTGLD
SDDDDIITIGTVPFTLDRIFLNQAKHWTVRPQKQLAEDSVVIHGITHSDVLDAPDLSEVF
DQVLEEMAGKIMVVHYERIEREFFNRALIARIHEGIEFPVVDTMHIETQIQQRDTGGFIN
KIRGKKPQSVRLNASRMRYGLPQYTPHHALTDAVATAELLQAQIAYHYDRKQPISQHWI
NT seq 720 nt   +upstreamnt  +downstreamnt
atgttcaataaattgatgagcgcaccaagtatagactggccagccaagtttaaacgtaag
tcggaaaatgctcgggacgaacgcttaaaaacgtacttcagccaagacttaccagtggcg
acaacccctttggaagacataacgtttttggctatggactttgagacgactggattagat
tctgacgacgatgacataatcacgattggaaccgtgccatttacattagatcgcattttc
ctcaaccaagcaaagcactggaccgtcagacctcaaaagcaattagcggaagactctgtt
gtgatacatggtattactcattcagacgtgctcgatgccccagacctgtctgaagttttt
gatcaagtgctcgaagagatggcaggaaaaattatggttgtgcattatgagcgaattgaa
cgagagttttttaatcgcgcattaatcgcacgcatacatgaaggtatcgagtttcccgtg
gtcgacacaatgcatatcgaaacacaaattcagcaaagagatacaggcggattcataaac
aaaatccgtggtaaaaaacctcagtctgttcgactgaatgcaagccgaatgcgttacgga
ctaccacaatatacacctcaccatgcactgacagacgcggtcgccacggcagagttgctt
caggcgcaaatcgcgtaccattacgatagaaagcagccgatcagccaacactggatttga

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