Vibrio japonicus: NP165_15860
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Entry
NP165_15860 CDS
T08510
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vjp
Vibrio japonicus
Pathway
vjp00260
Glycine, serine and threonine metabolism
vjp00460
Cyanoamino acid metabolism
vjp00630
Glyoxylate and dicarboxylate metabolism
vjp00670
One carbon pool by folate
vjp00680
Methane metabolism
vjp01100
Metabolic pathways
vjp01110
Biosynthesis of secondary metabolites
vjp01120
Microbial metabolism in diverse environments
vjp01200
Carbon metabolism
vjp01230
Biosynthesis of amino acids
vjp01240
Biosynthesis of cofactors
vjp04981
Folate transport and metabolism
Module
vjp_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NP165_15860
09102 Energy metabolism
00680 Methane metabolism
NP165_15860
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NP165_15860
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NP165_15860
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NP165_15860
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NP165_15860
Enzymes [BR:
vjp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NP165_15860
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UUM33023
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Position
2:592649..593944
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AA seq
431 aa
AA seq
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MNNTYQNHSLENFFSTNLSATDDAVFAGIQAEFSRQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFKCEYANVQPHSGAQANGAVKLALL
QPGDTILGMSLDAGGHLTHGARPALSGKWFNAVQYGVDRETLEINYEDVRALAIEHKPKM
IIAGGSAIPRTIDFAKFREIADEVDAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNHEDIIKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFKTYIDSV
ITNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DSEKPMITSGIRLGTPAGTSRGFGAEEFKLIGNWIGDVLDGLVENPEGNAEVEQRVRKEV
KALCNRFPLYQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacacttatcagaatcacagcctagagaactttttctctaccaacctttctgct
acagacgatgcggtttttgcaggtatccaagctgaattttctcgtcagaatgaacaaatt
gagctaattgcttcagagaacatcgtatctaaagcagttatgcaagctcagggcacttgc
cttacaaataaatatgcagaaggctacccaggtcgacgttactacggtggttgtgaacac
gttgataccgtagaggcaatcgcgattgaacgcgctaagaaactttttaagtgtgaatac
gcaaacgttcaacctcactcaggcgcacaagcaaatggcgcagttaaactggctcttctt
cagccaggcgacacgattcttggcatgtctttagacgctggtggtcacctaactcacggt
gcgcgccctgctctatcaggtaaatggtttaacgctgttcaatatggtgttgaccgtgaa
acactagaaatcaactacgaagatgtgcgtgcacttgccattgagcacaaaccaaaaatg
atcattgcaggtggtagtgcgattccacgtactatcgacttcgctaaattccgtgaaatt
gcagacgaagtggatgcaatcctaatggttgatatggcacacatcgcgggtcttatcgcg
actggtgctcaccctagcccactaccacacgcacacgttgtaacaacaacaacgcacaaa
acactgcgtggtcctcgtggcggcatgatcctgactaatcacgaagacatcatcaaaaag
attaactcagcggtattccctggccttcaaggtggcccactgatgcacgttattgcggca
aaagccgtggcatttggtgaagctttggggcctgaatttaaaacttatattgattcggtg
atcaccaacgcaaaagttcttgctgaagtattgcaaactcgcggttgcgacattgtgact
ggcggtactgatactcacctgatgcttgttgacctacgccctaaaggtttgaaaggcaac
aaagcagaagaagcactagagcgtgcggggatcacatgtaataaaaatggcatcccattc
gattcagagaagcctatgattacatcgggtatccgtttgggtacaccagctggcacaagc
cgcggctttggcgcagaagaattcaagctcatcggtaattggattggcgatgtactggat
gggttagtagaaaacccagaaggcaacgcagaagtagaacaacgcgttcgcaaagaagtg
aaagcgctgtgtaaccgcttccctctttaccaataa
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