Vibrio japonicus: NP165_15870
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Entry
NP165_15870 CDS
T08510
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vjp
Vibrio japonicus
Pathway
vjp00260
Glycine, serine and threonine metabolism
vjp00630
Glyoxylate and dicarboxylate metabolism
vjp00670
One carbon pool by folate
vjp00785
Lipoic acid metabolism
vjp01100
Metabolic pathways
vjp01110
Biosynthesis of secondary metabolites
vjp01200
Carbon metabolism
Module
vjp_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NP165_15870 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NP165_15870 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NP165_15870 (gcvP)
00670 One carbon pool by folate
NP165_15870 (gcvP)
Enzymes [BR:
vjp01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
NP165_15870 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF6227
Motif
Other DBs
NCBI-ProteinID:
UUM33025
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All DBs
Position
2:594485..597349
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AA seq
954 aa
AA seq
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MTELLQSLSTQNEFVARHNGPNKSDQQKMLDAINVASLDALIEETVPAQIRLEKPLNIAE
AKSEADMLAAMREFANQNQIKRTFIGQGYYNTFTPNVILRNVFENPGWYTAYTPYQPEIS
QGRLEALLNYQQMVMDLTGMEIANASLLDEATAAAEAMTLCKRAGKSKSNVFFVADDVHP
QTLEVVKTRAKYIGFDVQVGSLESLPEQDVFGALVQYPGTTGEVRDLTDIIAKAQANKTL
VTVATDLLASTLLKPAGEMGADVVIGSAQRFGVPMGYGGPHAAFMATRDKHKRTMPGRVI
GVSIDVKGNQALRMAMQTREQHIRREKATSNICTAQALLANMASFYAVFHGAEGLRTIAR
RTHHMTAILAAGLTKSGYELAHNSFFDTITINSDSKTEELYAKAQAADINLRKLDGKLGI
SFDETTTTDDIDTLFAVFGVTQDVNALSSEIASNEFAAIPEALRRTSEFLTHPVFNTHHS
ETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPVTWPEFGSIHPFAPLEQAAG
YAALAKDLKQKLCEITGYDEFSLQPNSGASGEYAGLIAIQRYHESRGEGHRNVCLIPSSA
HGTNPATASMVSMKVVVVKCDEEGNIDMNDLAAKIEKHKDNLSSIMITYPSTHGVYEEQV
KEVCEMVHAAGGQVYLDGANMNAQVALTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHIENGVVGKEFAVSAADMGSASILPISWAYIAMMGEAGLKEATKVAIL
NANYVMERLRPHYPVLYRGTNGRVAHECIIDIRPLKEETGISEEDIAKRLMDYGFHAPTM
SFPVAGTLMVEPTESEDLEELNRFCDAMIAIREEMAKVKNGEWPLENNPLVNAPHTQVDL
YAEEWERPYSRELGCFPSKATKSWKYWPTVNRVDNVYGDRNLICTCPSIESYED
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattacttcaaagcctcagcacacaaaatgagttcgttgctcgccacaacgga
ccaaacaaatctgaccaacaaaaaatgttggacgcgatcaacgtagcaagcctagacgca
cttatcgaagaaaccgttccagctcaaattcgcttagagaagcctctgaacattgcagaa
gcaaaaagcgaagcggatatgcttgcagcaatgcgtgagttcgctaatcaaaaccaaatc
aagcgtacattcatcggtcaaggttactacaacaccttcacaccgaatgtcattctacgc
aacgtatttgaaaacccaggttggtacacagcctacacgccttaccagccagagatctct
caaggtcgtctggaagcgcttctaaactaccaacaaatggtcatggacctaactggtatg
gaaatcgcgaacgcttctctactggatgaagcgactgcagcagcagaagcgatgacactg
tgtaagcgcgcaggtaagagtaaaagtaacgtattctttgtggctgacgacgttcaccca
caaacactagaagtagtaaaaactcgtgcgaaatacatcggctttgacgtacaagttggt
tcccttgagtcgctaccagaacaagacgtattcggcgcactagttcagtacccaggcaca
acaggtgaagttcgtgatctaacggatatcatcgctaaagcacaagcaaacaaaacgcta
gtgactgttgcaactgacctactagcctctactctgctaaaaccagcaggtgagatgggc
gcagatgtggtcatcggctcggctcagcgtttcggcgtacctatgggttacggcggtcca
cacgcagcattcatggcaacgcgtgataagcataagcgaacaatgccaggccgcgttatc
ggtgtgtctatcgacgtaaaaggcaaccaagcacttcgcatggcaatgcaaacacgtgag
cagcacatccgccgcgaaaaagcgacatcaaacatctgtacggcgcaagcactgctagcg
aacatggcgtctttctacgcggtattccacggtgcagaaggtttacgcacgattgctcgt
cgtactcatcacatgactgcaattctggctgctggcctaactaaatctggctacgagctt
gctcacaacagcttcttcgacaccatcactatcaactctgatagcaaaacagaagagctt
tacgcgaaagcacaggctgcagatatcaacttgcgtaagctagatggcaaactaggtatc
agcttcgacgaaacaacaaccactgacgacatcgacacgctatttgccgtgtttggcgta
acacaagacgtgaacgcactatcttcagaaatcgcgagcaacgaatttgcagcgattcca
gaagcgctacgccgcacatctgagttcctaactcacccagtgttcaacacacaccacagc
gaaacgcaaatgatgcgttacctaaaacagcttgagaacaaagacttctcactgactcac
ggtatgatcccgctaggcagctgtaccatgaagttgaacgcagcagcagaaatgatccct
gtgacttggcctgaatttggctcaattcacccgttcgctccattagagcaagcggcaggt
tacgcagcactagcgaaagacttgaaacagaaactgtgtgaaatcaccggttacgacgag
ttctctctacagccaaactctggtgcttcaggtgagtacgcaggtcttatcgcgattcaa
cgctaccacgaaagccgtggcgaaggtcaccgcaacgtatgtttgatcccaagctctgcg
cacggtactaaccctgcgacagcatcaatggtgtcaatgaaagtggtcgttgttaagtgt
gatgaagaaggcaacattgacatgaacgatcttgctgcgaaaatcgagaagcacaaagac
aacctttcaagcatcatgatcacttacccttctacgcacggcgtatacgaagagcaagtg
aaagaagtatgtgaaatggttcatgctgctggcggtcaggtttacctagacggcgcgaac
atgaacgctcaggttgcgttgacatctccaggctttatcggctctgacgtgtctcactta
aacctacacaaaacgttctgtatccctcacggtggcggcggtccaggtatgggtcctatc
ggtgttaaatctcacctagcgcctttcctaccaggtcacattgagaacggtgttgtaggt
aaagagtttgcggtttctgcagcggatatgggtagcgcatctattctacctatctcttgg
gcttacatcgcgatgatgggtgaagctggtctaaaagaagcgactaaagttgcgattctg
aacgcgaactacgtgatggagcgtctacgccctcactaccctgttctttaccgtggtaca
aatggccgcgttgcgcacgaatgtattattgatattcgtcctctaaaagaagaaacaggc
atcagtgaagaagatatcgcaaaacgcttgatggactacggtttccacgcaccaaccatg
tcattcccagtagcaggcacgctaatggttgagccaaccgaatctgaagatttagaagag
ctaaaccgtttctgtgatgcaatgatcgcaatccgtgaagagatggctaaagtgaagaac
ggtgaatggccactagagaacaaccctctggttaacgcgccacacactcaagtggatctt
tacgctgaagagtgggagcgtccatactctcgcgaacttggctgcttcccatcgaaagca
accaaatcttggaaatactggccaacagtaaaccgtgtagacaacgtttacggcgaccgt
aacctaatctgcacatgcccaagcatcgagagctacgaagactaa
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