Vibrio japonicus: NP165_18855
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Entry
NP165_18855 CDS
T08510
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
vjp
Vibrio japonicus
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vjp03009
]
NP165_18855
03016 Transfer RNA biogenesis [BR:
vjp03016
]
NP165_18855
Enzymes [BR:
vjp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
NP165_18855
5.4.99.29 23S rRNA pseudouridine746 synthase
NP165_18855
Ribosome biogenesis [BR:
vjp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NP165_18855
Transfer RNA biogenesis [BR:
vjp03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
NP165_18855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UUM32342
LinkDB
All DBs
Position
2:complement(1201863..1203542)
Genome browser
AA seq
559 aa
AA seq
DB search
MHQPENLFTRFNSDTSPYSLPEKFTFPFYYEPHPLCVMAAEQLQQHLLTQTDWQHDFGTD
GVDQGTGKMFGVLLVRSPQGELGFFSAFSGKIADQNLLPGFVPPVFDMLAEQSFFRGELA
EITELNEQVSQLQANPKLLQLKQTLSQYQTAYVQAEQTQREKMIQGRAARKSKRKQAEQE
LYAQELDALLAQLSKESVAEKNVLKYLKLEWDGKIANVQAELVQLTTQLDSLKEERKQLS
NALQNKLFEQYRFLNIRGEEESLRAIFANTTSPTPPAGAGECAAPKLLHFAFKHGYTPIA
LAEFWWGVSPKSEIRQHTKFYPSCNSKCQPILGHMLTGMSVDENPLAESWAKDKKLEILF
EDDAMVIVNKPSGLLSVPGKTIKDSAYTRLQEKYPDVEGPFVIHRLDMATSGLLVFALTK
RANKSLQKQFISRSVQKRYVALIEGELETQSGEITLPMRGDPDDRPRQLVCFEHGKPAET
YWQQIDVKDGRSKLYLYPKTGRTHQLRVHCAHHLGLNMPMVGDGLYGEKDNRLHLHAERL
ELEHPYSKEQMVFQAEPEF
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaacctgaaaacttgtttacccgctttaactcagataccagcccctattcacta
cccgaaaagttcacttttccgttttactacgagccgcatccactgtgtgtcatggctgcc
gagcaattgcagcaacacttgctcactcagacagattggcaacacgactttggcaccgac
ggggttgaccaaggaacaggcaaaatgtttggcgtcttgttggtaagatcaccacaaggt
gaactgggattctttagtgcgttttctggaaagatcgcagaccaaaacttgctaccaggc
tttgttcctcctgtgtttgatatgcttgctgagcaaagcttcttccgtggcgagttagcc
gaaattactgagctgaatgaacaggtcagtcaactccaggcaaacccaaaacttttgcaa
cttaagcagacgttaagccagtatcagactgcctacgtacaggccgagcagacgcagcgt
gagaaaatgattcaaggtcgtgcagcgcgtaaatcaaagcgaaaacaggcagagcaagaa
ctttatgctcaagaactggatgcgctattagctcaactcagcaaagagagtgtggctgag
aagaacgtactgaaatacttaaagttggagtgggatggaaaaattgccaatgtgcaagcc
gaattagtgcaactaacaacacaactcgactcactgaaagaagaacgcaaacagctgtct
aatgcactccaaaacaagctgtttgaacaatatcgtttccttaacatccgcggcgaagaa
gagtcattacgagccattttcgccaacacgactagccctactccaccagcaggtgcagga
gagtgcgcagcaccaaaactgctccatttcgcgttcaaacacggctacaccccaatcgct
ttagccgagttttggtggggcgtatcgccaaagtccgagattcgccaacacacaaagttc
tacccttcgtgcaacagcaaatgccaacctattctaggtcatatgctaactggcatgagc
gtcgatgaaaacccgctagcagaaagctgggcgaaagataaaaagctggaaatactgttt
gaagatgatgcgatggttatcgtgaacaaaccgtctggtttactttctgttcctggtaaa
acgatcaaagattctgcgtatacacgcttgcaggagaagtatccggatgttgaaggacca
ttcgtaattcatcgactcgacatggcgacatctggcttgctggtatttgcactgactaaa
cgggctaataagagcctacagaaacagtttatctcccgtagcgtacagaagcgttatgtc
gcgcttattgagggtgaacttgaaactcagagtggtgaaatcacgctgccaatgcgtggt
gatccagacgatcgcccacgccaattggtctgcttcgagcacggtaagcctgcggaaact
tattggcaacaaatcgacgtcaaagatggtcgctctaagctctacctttaccctaaaacg
ggacgtacgcaccagttacgcgttcactgtgctcaccacttggggttaaatatgccgatg
gtcggtgacggtctttatggcgaaaaggacaaccgattgcacctacacgctgaaaggctc
gaacttgagcacccgtacagcaaagagcaaatggtttttcaagcagagccggaattctag
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