Vibrio kanaloae: BTD91_01665
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Entry
BTD91_01665 CDS
T07086
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
vka
Vibrio kanaloae
Pathway
vka02020
Two-component system
vka02024
Quorum sensing
vka05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vka00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BTD91_01665
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BTD91_01665
05111 Biofilm formation - Vibrio cholerae
BTD91_01665
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vka02022
]
BTD91_01665
Two-component system [BR:
vka02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
BTD91_01665
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
AAA_2
AAA_19
AAA_22
HTH_29
HTH_23
PIF1
HTH_7
HI0933_like_1st
PLCB1-4-like_EFh
Motif
Other DBs
NCBI-ProteinID:
QPK04692
LinkDB
All DBs
Position
1:complement(409399..410787)
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AA seq
462 aa
AA seq
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MQSKTLDNKSKYLLMVEDTASVAALYRSYLTPLEIDINIVGTGRDAIESLNHRIPDLILL
DLRLPDMTGMDVLFAVKQKYPEVPVIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRI
TVNNAIRKATKLKNSSENPGNQNYQGFIGSSQTMQQVYRTIDSAASSKASIFITGESGTG
KEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADG
GTLFLDELCEMDLELQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRF
REDLYYRLYVIPLHLPPLRERGEDVIEIAYSLLGYMSVEEGKAFVRFAQEVLDRFNQYEW
PGNVRQLQNVLRNVVVLNNGKEITLNMLPPPLNQPIENRLRLKEKQNEDITVKDIFPLWI
TEKTAIEQAIKACDGNIPRAAGFLDVSPSTIYRKLQTWNAKP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaaaaacgctagataacaaatcaaagtatttgttgatggtggaggatacggct
tcggtcgcagcgttgtatcgctcttatctgacaccgctcgaaattgatatcaacattgtt
ggcacaggtcgcgatgcaattgagagtttgaatcatcgaatcccagatctaattttgtta
gatctgcgtcttcctgatatgacgggtatggacgtactatttgctgtaaaacaaaaatac
cctgaagtccccgttatcttcatgacggctcatggctcgatcgataccgccgtagaagcc
atgcgtcatggttctcaagatttccttattaaaccttgtgaagccgaccgactccgtatt
acggtgaataacgcgatacgcaaagccactaaacttaagaacagctctgaaaatccgggt
aatcaaaactaccaaggattcatcggtagtagccaaaccatgcagcaggtttaccgaacc
atcgattctgccgcatcaagtaaggcgagtatttttatcacaggtgaaagtggtaccggt
aaagaagtatgtgcagaagccattcatgcagcgagtaagcgtggtgataagcctttcatt
gcgattaactgcgcggctatccctaaagatttgattgaaagtgagctgtttggccacgtc
aaaggtgcctttacgggcgcagcaaccgatcgccaaggtgctgctgaactagcagatggt
ggaaccctgttcctcgatgagttatgcgaaatggatcttgaattgcaaaccaagcttctg
cgtttcattcaaaccggcaccttccaaaaagtcggttcttcaaaaatgaagagcgttgat
gtgcgctttgtttgcgcgaccaaccgtgacccttggaaagaagtacaagaaggtcgcttt
agagaagatttatactatcgtttatacgtgatccctcttcacttgccgccactgcgtgag
cgtggggaagatgtcatcgagatcgcatactcgttactaggctacatgtcggttgaggaa
ggtaaggctttcgtacgctttgctcaggaagtgttggatcgctttaatcaatacgagtgg
ccgggtaacgttcgtcagctacaaaacgttttacgaaatgtggtggtattgaataatggt
aaagagattactctgaacatgctcccacctccactgaaccagccgattgagaatcgtctg
cgactgaaagagaagcagaatgaagacatcactgtaaaagatattttcccattgtggatc
actgagaaaacggcaatcgaacaggccataaaagcgtgtgacggtaatatccctcgcgcg
gctggtttcttggatgtcagtccatcaacgatttaccgtaaattgcaaacgtggaatgcg
aagccgtaa
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