Vibrio kanaloae: BTD91_02100
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Entry
BTD91_02100 CDS
T07086
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
vka
Vibrio kanaloae
Brite
KEGG Orthology (KO) [BR:
vka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vka03016
]
BTD91_02100 (rnd)
Enzymes [BR:
vka01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BTD91_02100 (rnd)
Transfer RNA biogenesis [BR:
vka03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BTD91_02100 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
QPK04769
LinkDB
All DBs
Position
1:complement(506586..507704)
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AA seq
372 aa
AA seq
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MDYQIITQLKDLERVCQQARQADVVMLDTEFVRTRTYYPQLGLIQLFDGETLSLIDPIAL
GEMTPFVGLLKDASVLKVLHACGEDLEVFQNAFGCTPTPVVDTQIMAAFLGHGLSTGFAA
LVSEFVGVDLDKSESRTDWLARPLSQKQLDYAAADVHYLMPMYNKLLEKVMEAGWWEAAQ
QESDLQVAKRIRKVNPDTAYLDIKGAWQLKPQQLAILRPLATWRLKEAIKRDLALNFVFK
EQDLWAVARFAMKDPKHMEQEGFDYRSVRRHGAKISSIVKLAEHTPEEEYPAPVERLMDY
PGYKQIFKVLKDEVKTASQHSGLATEFLASKKQLNQVLSWVWKHDRNPEKLPDVMQGWRL
EVVGEKLSKAIK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtggattatcaaatcattacccaattgaaagaccttgagcgagtttgccaacaagcacgt
caagccgatgtcgttatgcttgatacggagtttgttcgtacaagaacctattaccctcaa
ttaggcttgattcagttatttgatggtgaaacgctgtcactgattgaccctattgctctt
ggtgaaatgacaccatttgttggattgttgaaagacgcttctgttctgaaagtgctgcat
gcttgtggtgaagatttggaagtgttccaaaatgcatttggttgtacaccaaccccagtg
gttgatacgcagatcatggcggctttcttaggtcatggtttatcaacgggctttgcagct
ctggtttcagagtttgtcggtgttgatctcgataagagtgaatctcgcacagactggctg
gcgcgtccgctttctcaaaagcaattggattacgcagcggcagacgtgcattacttaatg
ccaatgtacaataagcttctagaaaaagtgatggaagctggctggtgggaagcggctcaa
caagagtctgacttacaagttgccaagcgcatccgtaaagtaaacccagacactgcctac
cttgatattaaaggtgcgtggcagcttaaacctcaacagctagcgattttgagaccgtta
gccacttggcgtttaaaagaagcgattaagcgtgatttagcgttgaactttgttttcaaa
gaacaagatttatgggcagtggcgcgattcgcgatgaaagatcctaagcacatggagcaa
gaaggttttgattaccgctctgtacgccgtcatggcgccaagattagctcaatcgttaag
ttggctgaacacacgccagaagaagaatatccagcaccagtagaacgtctaatggattac
ccaggttacaaacaaatcttcaaagtgttgaaggatgaagtgaaaaccgcatcacaacac
agtggtttggctacagaatttttggcatctaaaaagcaacttaaccaagtgttaagctgg
gtgtggaagcacgatcgtaacccagagaagctgcctgatgtgatgcaaggctggcgttta
gaagtagttggcgaaaagctgagtaaagcgatcaaataa
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