Vibrio kanaloae: BTD91_02735
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Entry
BTD91_02735 CDS
T07086
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vka
Vibrio kanaloae
Pathway
vka03030
DNA replication
vka03430
Mismatch repair
vka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BTD91_02735 (dnaE)
03430 Mismatch repair
BTD91_02735 (dnaE)
03440 Homologous recombination
BTD91_02735 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vka03032
]
BTD91_02735 (dnaE)
03400 DNA repair and recombination proteins [BR:
vka03400
]
BTD91_02735 (dnaE)
Enzymes [BR:
vka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BTD91_02735 (dnaE)
DNA replication proteins [BR:
vka03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BTD91_02735 (dnaE)
DNA repair and recombination proteins [BR:
vka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BTD91_02735 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QPK04892
LinkDB
All DBs
Position
1:complement(645160..648639)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFVHLRVHSDFSMVDGLSKVPPLVKKVAEMGMPALALTDFTNLCGLVKFYGTAHGC
GVKPIIGADFLMQSPDFGDELTKLTVIATDNKGYNNLTLLISKAYLRGHIQHQPVIDKEW
LIEHAEGLIILSGAKEGEIGKALLKGNRELVASNVEFYKTYFPDRFYLELIRTGRPDEES
YLHFALELAEQADLPVVATNEVVFLTEDLFDAHEIRVAIHDGYTMVDPRRPKNYSAQQYL
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPNFPTEGLAIEDFLIKKSEEGL
ERRLAFLFPDEKVRAERRPEYDERLKIELEVVNNMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALDITDLDPLEYDLLFERFLNPERVSMPDFDIDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLEKAFLAEPA
LPELYDGDEEVRELIDKCRILEGCTRNAGKHAGGVVISPTTITDFAPIYADAEGHFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLVNPRLKREGKEPVRIESIPLDDKASFNLL
QNSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
VSYPDETWQHDSLKETLEPTYGIILYQEQVMQIAQILAGYTLGGADMLRRAMGKKKPEEM
AKQRSIFKEGAEANGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVIGLVDECFRMKLKLLPPDINSGLYRFNVDEDGAIVYGIGAIKG
VGEGPIEAIIEARNKGGYFKDLFDFCARLDLKKVNKRVIEKLILSGALDRLGPHRAAMMA
SLKDAVKAASQHHHAESFGQSDMFGVLTDAPEEVEHKYTQVPKWPEKVWLEGERETLGLY
LTGHPVNAYIKELAKYTSCRLKDATPTRRDQSLTIAGLVIAARVMTTKRGTRIGLMTLDD
RSGRMEVMLFSDALDRYAELLEKDKIVVVSGQVSFDDFNGGLKMSAREVMDLGSAREKYA
RGVSISIDQSQINDQFFERFGQILEPYRAGTVPVNVYYQRADARARLTLGTEWRVTPSDT
LLDELKQLLGNSQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccaaaatttgttcacctacgcgtacacagtgacttttcgatggtggatggc
ctatctaaggtaccgccattagtcaaaaaagtcgctgaaatgggtatgcctgctctagca
cttaccgactttaccaacctttgtggtttggttaagttctacggtactgcccatggatgc
ggggttaagccaattattggtgctgacttcttgatgcagtctccagatttcggtgatgag
ttaacgaaactcaccgtcattgcaaccgataataaaggctataacaacctaacgctgctg
atatcaaaagcctaccttcgtggtcatatacagcatcagcctgttattgataaagagtgg
ttaattgagcatgctgaaggtctgatcatcctatcgggcgcgaaagaaggcgagattggt
aaggcactactgaaaggtaaccgtgaactggttgcaagtaatgtcgagttttacaaaacg
tatttcccagaccgcttttacctggaactgattcgtaccggacgtccagacgaagagtct
tacttgcactttgcgttagaacttgctgaacaagcagacttgcccgttgtagcgaccaac
gaagttgtgttcttaactgaagacttgtttgatgctcatgaaattcgagttgcgattcat
gatggctacacaatggtcgatccgcgtcgtcctaaaaactacagcgcgcaacagtatctt
cgtagcgaagaggaaatgtgtgaacttttctctgatattcctgaagctcttgagaacagt
gttgagattgctaagcgctgtaacgtaaccgttcgtctaggtgaatatttcctacctaac
ttcccaacggaaggtttggcgattgaagatttcctgataaagaaatctgaagaaggcctt
gagcgacgtctagcgttcctatttccagatgaaaaggttcgagcagagcgtcgtcctgag
tacgatgaacgactcaaaatcgagctcgaggttgtcaacaacatgggtttccctggctac
ttcttgatcgtaatggaattcatccagtggtcaaaagataacgatgtgccggtaggtccg
ggtcgtggttctggtgccggctctctagtggcttacgcattggatatcaccgatctcgat
ccacttgaatacgacttgctgttcgaacgtttcttgaacccagaacgtgtatccatgccc
gatttcgatattgacttctgtatggataagcgtgaccaagttattgatcacgttgctgaa
atgtacggtcgtgatgcggtttctcagatcatcacttttggtaccatggcggcaaaagcg
gtaatccgtgacgtcggccgtgtgcttggtcatccgtttggttttgtggaccgaatttct
aagcttgtgccgccagatccgggcatgacgctagaaaaagccttccttgctgagcctgca
ttgccagagctttacgatggtgatgaagaggttcgcgaactgattgataagtgtcgtatc
cttgaaggctgtacgcgaaatgccggtaagcacgcggggggggttgttatttcaccaacc
acgattaccgactttgcgcccatttatgctgatgcggaaggtcacttcccagtaacgcag
ttcgacaagaatgacgttgaaactgctggcttggttaagttcgacttcttgggcttacgg
acactgaccatcattgattgggcgttaggcctagtcaaccctcgcttgaagagagaaggc
aaagagccggttcgtattgagtcgatacctcttgatgataaagcgtcgtttaacctatta
caaaattctgaaactaccgcggtattccagctggaatcgcgtggtatgaaagacttgatc
aaacgtctacagcccgactgttttgaagatatcatcgcattggtagctctgttccgtccg
ggtcctttgcaatcgggcatggtagataactttattgaccgtaaacacgggcgagaagcg
gtatcgtaccctgatgaaacatggcaacatgactcactcaaagagacgctagaaccaacg
tatggcatcatcctgtaccaagagcaggttatgcaaatcgcacagatcctcgcaggctat
acgcttggcggagcggacatgttgcgtcgtgcaatgggtaagaaaaagccagaagagatg
gcaaagcagcgtagtattttcaaagaaggtgcggaagctaacggtattgatggcgaactg
gccatgaaaatcttcgacttggtagagaagtttgcaggttacggatttaacaaatctcac
tcagcggcatacgcactggtttcctatcaaacgctatggctgaaaacacattaccctgct
gagtttatggcggcggtaatgacggcggatatggataacaccgagaaggttattggcctt
gttgatgagtgtttccgtatgaagctcaagctgctgccgcctgatatcaactctggccta
tatcgctttaatgttgatgaagatggcgcgattgtttatggcattggcgcgattaaaggg
gtaggtgaaggccctattgaagcgatcatagaagcgcgcaataagggcggttattttaaa
gatttattcgacttctgcgcgcgtcttgatctgaaaaaggtcaacaaacgtgttatcgaa
aagttgattctatccggtgcgttagatagattaggccctcaccgtgcagcaatgatggca
tctttgaaagatgcagttaaagcggcgagccaacatcaccacgccgagtcttttggtcaa
tctgatatgtttggtgtgttgactgatgctccagaagaggttgaacataagtatacccaa
gtgcctaagtggccagaaaaagtttggcttgaaggtgaacgtgaaacgcttggtttgtat
ttaacgggtcacccggttaatgcttatatcaaagagttagcgaaatacaccagctgtcgt
ttgaaagatgccacgccaacgcgtcgtgaccagtcattaacgattgctggtttggtgatt
gcggcgagagtaatgaccacaaaacgtggtacacgaattggtttgatgacacttgatgac
cgatcgggccgaatggaagtgatgttattctctgatgcactcgatcgctatgctgaattg
ctcgaaaaagacaaaattgtggtcgtttctggacaggtcagctttgatgacttcaacggt
gggcttaaaatgtccgcgcgcgaggtcatggacttaggaagcgcccgtgaaaaatatgct
cgaggggtctcgatatctatcgaccaatcccagattaatgatcaattttttgaacgcttt
ggtcaaatcttagaaccttatagagccggaacggtcccagtcaatgtatactaccaacgt
gccgacgctagagcgcggttaacattgggcacagaatggcgtgtgacgccaagtgacaca
ttgctagacgaattaaaacagctgcttggaaatagccaagtagaactcgaatttaactaa
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