Vibrio kanaloae: BTD91_06635
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Entry
BTD91_06635 CDS
T07086
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vka
Vibrio kanaloae
Pathway
vka03420
Nucleotide excision repair
vka03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BTD91_06635 (uvrD)
03430 Mismatch repair
BTD91_06635 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vka03400
]
BTD91_06635 (uvrD)
Enzymes [BR:
vka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTD91_06635 (uvrD)
DNA repair and recombination proteins [BR:
vka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BTD91_06635 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BTD91_06635 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
PhoH
Motif
Other DBs
NCBI-ProteinID:
QPK05579
LinkDB
All DBs
Position
1:1522759..1524933
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AA seq
724 aa
AA seq
DB search
MIDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLQSVEQASPFSIMS
VTFTNKAAAEMRGRIEELMMGSSSGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQ
VRLLRRLIKAQNLDEKQWPAKQASWWINGKKDEGLRPNHIDAYHDPITQTWLKIYSAYQE
ACDRAGLVDFAEILLRSHELLRDKKHIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGP
DCRVMIVGDDDQSIYGWRGAKIENIQKFLDEFPGASTVRLEQNYRSTKTILQASNELISN
NTERMGKELWTDGNDGEPISVYSAYNELDEARFTVSKIKEWQEKGGALEDTAMLYRNNAQ
SRVLEEALIQGGLPYRIYGGMRFFERQEIRDALSYMRLMSNRSNDAAFERVVNTPTRGLG
DKTLETIRLAARDRGATMWEASVALIEEQVLPGRAAGALSRFIELINALEDDTLELSLHE
QTDHVIKSSGLFAMYEQEKGEKSKARIENLEELVTATRQFEKPEEADEMSMLNAFLTHAA
LEAGEGQADEFDDAVQLMTLHSAKGLEFPMVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMEKLYITYAEMRRLYGQDKYHKPSRFIRELPETCLDEVRMKAQVSRPASSGRF
SQTAVKENFNETGFSLGSRVKHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAR
LEQL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatagatccttcgcttttacttgatggcctaaacgacaaacaacgtgaggcggtcgca
gcacctttagaaaacctacttattctggcaggtgctggtagtggtaaaacgcgagtgttg
gtgcatcgtatcgcttggctgcaaagcgtagagcaagcctcaccgttttctatcatgtca
gtaaccttcaccaacaaagcggcagcagagatgcgtggccgtattgaagagttgatgatg
ggtagttcgtcaggcatgtggaacggcaccttccacggtatttgccaccgcatccttcgt
gctcactacttagatgcaaagctgccagaagatttccaaatcattgattctgatgatcag
gttcgtttgctacgccgcttaatcaaagcgcaaaaccttgatgaaaagcagtggcctgct
aagcaagcttcttggtggattaatggcaagaaagacgagggattacgcccaaatcacatc
gacgcctaccatgatccaatcactcaaacgtggttaaaaatttactctgcttaccaagaa
gcatgtgatcgtgctggtctggtcgactttgcggaaatcttgttgagatcgcatgaacta
ttacgcgataagaagcacatccgagagcactatcaagctcgcttcaagcacattcttgtc
gacgaatttcaagataccaacaacatccagtacgcctggctgcgcatgatggctggccct
gattgtcgcgtgatgatcgtaggcgatgatgaccaatctatctatggctggcgtggtgcg
aagatcgaaaatattcagaagttcttggatgaattcccaggagcttcaacggttcgactc
gaacaaaactaccgttcaaccaaaaccattctgcaggcgtcgaacgagcttatctcgaac
aacaccgaacgtatgggtaaagagctttggacggatggtaatgatggtgagcctatctct
gtgtactcggcttacaacgagctagatgaagcgcgtttcacggttagcaaaatcaaagag
tggcaggagaaaggcggcgcgctagaagataccgcaatgctttatcgtaataacgcacaa
tcgcgtgttcttgaagaagctttgatccaaggtggtctaccttaccgaatctacggcggc
atgcgattcttcgagcgtcaagaaatcagagacgccttgagctacatgcgcttaatgagc
aaccgcagtaatgatgcggcgtttgaacgtgtggttaatacgccaacgcgtggcttgggc
gataaaacgttagaaacgattcgtcttgctgctcgtgatcgtggtgcaaccatgtgggaa
gcgagtgttgctttgatagaagagcaagtgctacccggtcgtgctgcgggtgcattaagt
cgctttattgagctgattaatgcgcttgaagatgacacgctagaacttagcctgcatgaa
caaaccgaccacgtgattaaatcgtcgggcctatttgcgatgtacgagcaagagaagggt
gagaagtctaaggctcgtattgagaacttggaagaattggtaacggcgacgcgtcaattt
gaaaagccggaagaagcggatgagatgagcatgcttaatgctttcttgactcatgcagct
ttggaagcgggtgaaggtcaggctgatgagtttgatgatgcggttcagctaatgactctg
cacagtgccaaaggcctagagttcccaatggtattcatggtgggtgtcgaagaaggcatg
ttcccaagccagatgtcagcggaagaagcagggcgtttagaagaagaacgtcgcctgtgt
tacgtaggcatgactcgtgcgatggagaagctgtacatcacctacgcagagatgcgtcgt
ttgtacggacaagacaaataccacaaaccatcccgctttattcgtgagctgcctgagacc
tgtctggatgaagtgcgtatgaaagcgcaagtgagccgtccggcaagcagcggtcgcttt
agccaaactgccgtgaaagagaatttcaacgaaacaggctttagcttgggctctcgcgtg
aagcaccctaagtttggtgaaggtaccatcattaacttcgagggaagtggcccgcaaagc
cgagttcaagtcgcgtttaatggtgaaggcatcaagtggttggtgacggcttacgctcgt
ttagagcagctttaa
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