Vibrio kanaloae: BTD91_09035
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Entry
BTD91_09035 CDS
T07086
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
vka
Vibrio kanaloae
Pathway
vka02024
Quorum sensing
vka03060
Protein export
vka03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BTD91_09035 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BTD91_09035 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BTD91_09035 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vka02044
]
BTD91_09035 (ffh)
Enzymes [BR:
vka01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
BTD91_09035 (ffh)
Secretion system [BR:
vka02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BTD91_09035 (ffh)
Eukaryotic Sec-SRP protein
BTD91_09035 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_31
KTI12
T2SSE
AAA_30
Mg_chelatase
AAA_33
VirC1
APS_kinase
AAA_24
ABC_tran
AAA_18
AAA_19
Rad17
AAA_14
ATP_bind_1
AAA_16
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
QPK03424
LinkDB
All DBs
Position
1:2006027..2007412
Genome browser
AA seq
461 aa
AA seq
DB search
MFDNLTDRLSKTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVRDFVKRVKEGAV
GVEVSKSLTPGQEFIKIVQAELEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL
SKLLTERDKKKVLVVSADVYRPAAIKQLETLASDVGVDFFPSSSDQKPLDIANAAIDHAK
KKFYDVILVDTAGRLAIDEEMMGEIKELHTAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVVLTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLQKNVDTEKAEKLAKKFKEKKGFDLEDFREQLGQMHNMGGMMGMMDKLPGMSQL
PDNVKDKVDDKMFKQMEAIINSMTMKERQRPDLIKGSRKKRIAAGSGTQVQDVNRMLKQF
TQMQKMMKKMQKGGMKGMMRNMQGMMGGGGGMGGGFNPFGR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaacggatcgtctatccaaaacgctgaaaaatatcagcggtaaaggt
cgcctgaccgaagacaatattaaagagacgctgcgtgaagttcgtatggcactacttgaa
gccgacgttgcgctgcctgttgtccgcgattttgtaaagcgcgtaaaagaaggtgcggtg
ggtgttgaggtttctaaatctctcacacctgggcaagaattcattaagatcgttcaagct
gaacttgaagcggtaatgggtgagtctaacgaggctctgaacctagcagcgcaaccgcca
gccgttatcttaatggcaggcctacaaggtgcaggtaaaaccacatcggtaggtaagcta
tctaaacttctaaccgagcgcgacaagaaaaaagtcttggtcgtgtctgccgacgtttac
cgtccagcggcgatcaaacagcttgaaacgttagcaagcgatgttggtgtagacttcttc
ccgtcttcatctgatcaaaaacctcttgatatagccaacgctgcaatcgatcacgctaag
aagaagttctacgacgtgatattagtcgataccgctggtcgtttggctatcgatgaagag
atgatgggcgagatcaaagagcttcatactgcaattaatccagtagagacgctgttcgtt
gttgatgcgatgacaggtcaagatgctgcgaacactgcaaaagcttttggtgatgcgctg
ccactaaccggtgttgtcttaacgaaagtggatggtgatgcgcgtggtggtgctgcactg
tctgtacgtcatatcactggcaaaccgattaaattcttaggggttggtgaaaagactgat
gcactagaaccattccacccagatcgtgtcgcttctcgtattcttggtatgggtgacgta
ctgtctcttattgaagatctacagaaaaacgttgataccgagaaagcagagaaactggct
aagaagttcaaagagaagaaaggctttgaccttgaagacttccgtgagcagcttggtcag
atgcacaatatggggggtatgatgggcatgatggataagcttccaggcatgtcccaacta
ccggacaacgttaaagataaagttgatgacaagatgttcaagcagatggaagcgatcatc
aactctatgacaatgaaagagcgtcaacgtcctgacctaatcaaaggctcacgcaaaaag
cgtattgctgctggttcaggtacacaggtacaagatgtaaaccgtatgcttaagcaattc
acccaaatgcagaagatgatgaagaagatgcagaaaggtggcatgaaaggcatgatgcgc
aacatgcaaggtatgatgggcggcggtggtggtatgggcggtggctttaacccattcggc
cgataa
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