KEGG   Vibrio kanaloae: BTD91_12425
Entry
BTD91_12425       CDS       T07086                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vka  Vibrio kanaloae
Pathway
vka03030  DNA replication
vka03430  Mismatch repair
vka03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vka00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BTD91_12425
   03430 Mismatch repair
    BTD91_12425
   03440 Homologous recombination
    BTD91_12425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vka03032]
    BTD91_12425
   03400 DNA repair and recombination proteins [BR:vka03400]
    BTD91_12425
Enzymes [BR:vka01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BTD91_12425
DNA replication proteins [BR:vka03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BTD91_12425
DNA repair and recombination proteins [BR:vka03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BTD91_12425
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: QPK04042
LinkDB
Position
1:complement(2755268..2755984)
AA seq 238 aa
MNKLFRSPAVDWPFKFAQKLERSKDKRLKKFYSEPLPDPDTPLSEVTFLAVDFETTGLNS
AKDGIITIGLVPFTLNRIYLRQARHWTLRPKQKLEEESVVIHGITHNDIIDAPDLNEVLD
EILDAIAGHIPVVHYRRIEREFLDNALKVRLGEGIEFPVLDTLEIESQIQNRLVGGFWNR
LKGKKPASIRLGQSRRRYHLPDYTPHHALTDAIATAELLQAQIAHHFSPDMPVKDFWL
NT seq 717 nt   +upstreamnt  +downstreamnt
atgaacaaactatttagatcacctgcggtcgattggccttttaaatttgctcaaaaacta
gagcgttcaaaggataagcgtttaaagaagttctacagtgagccacttcccgatccagac
actccgctgtctgaggtgacctttttagctgtggattttgaaaccacaggcttaaattcg
gcgaaggatggcattattaccattggactagtaccttttacactcaatcgtatttatcta
agacaagcaaggcattggacgctaaggcctaagcaaaaactggaagaagaatctgtcgtt
attcacggtatcacacacaatgacatcatcgatgcgccggacttaaacgaggtgcttgat
gagattttggacgcaatcgccgggcatattcctgttgttcactaccgccgtattgagcgt
gagttcttagacaacgcgttgaaagtaaggttaggagaaggtattgaatttccagtatta
gatacactagaaatcgaatctcaaattcagaatagattggttggtggtttctggaataga
ctaaaaggtaagaaacccgcatcaataaggcttggacaaagccgacgtcgctaccattta
ccagattacaccccacaccacgctttgactgatgccattgcaacagcagagttactacaa
gcgcagattgcgcatcattttagccctgacatgccggttaaagatttctggttatag

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