Vibrio kanaloae: BTD91_14185
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Entry
BTD91_14185 CDS
T07086
Symbol
rsmF
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
vka
Vibrio kanaloae
Brite
KEGG Orthology (KO) [BR:
vka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vka03009
]
BTD91_14185 (rsmF)
Enzymes [BR:
vka01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
BTD91_14185 (rsmF)
Ribosome biogenesis [BR:
vka03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BTD91_14185 (rsmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QPK04366
UniProt:
A0A4U1Z1S4
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All DBs
Position
1:3123952..3125373
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AA seq
473 aa
AA seq
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MHANVYIPEEFLTHIKGIMPSHLDMASFIASCQKPLRKSIRVNTLKISVGDFLVRAKDKG
WELEPVPWCETGFWITADESEAPLGNTAEHMSGLFYIQEASSMMPPSALFQGEEDYQAVL
DTAAAPGSKTTQIAALMNNRGVLVANEYAASRVKVLHANIERCGVRNTALSNFDGRVFGG
WLPEQFDAVLLDAPCSGEGTIRKDADAMKNWTYQSVVDIADTQKDLIESAFQALKPNGVL
VYSTCTLSTEENQQVCYHLKETFGDAVEFESLESLFDDAKATTTEEGFLHIFPQVYDSEG
FFVARIRKLASVTPPEVKKRMGKFPFEKASKKTQQEVAEQLMSTLDIELPSDTQVWIRDK
DVWLFPEALEPMIGEFRFSRMGIKIAETHKKGYRWQHQVATTLATGNEANVVELSIEDAR
EWFMGRDVRPENLSGKGEVLVKYNGAIIGLGKWVGNRVKNGLPRELVRDKNLF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ttgcacgctaacgtatatatcccagaagaattcctaactcacattaaaggcattatgcca
agccacttagacatggcttcttttatcgcatcttgccaaaagccacttcgtaaaagtatt
cgagtaaacacactaaagatcagtgtcggagactttctcgtacgtgcgaaagataaaggt
tgggaactggaacctgtgccgtggtgtgaaacgggattttggatcaccgctgatgaaagc
gaggcgcctttaggcaatacagctgaacacatgtctggcttattttatatccaagaagcc
agctctatgatgccaccttctgcattgtttcaaggcgaagaagattatcaagccgtgtta
gatacagctgctgcacccggctctaaaacaacgcaaatcgcggcgctaatgaataatcgc
ggcgtactggttgccaatgagtacgcagcaagccgagtgaaagtacttcacgctaacatc
gagcgttgtggcgttcgcaatacagcgctgagcaattttgatggacgtgtattcggcggc
tggttaccagaacagtttgatgccgtattactagacgccccctgctctggtgaaggtacg
attcgtaaagacgcggatgcgatgaagaactggacatatcaatctgtagtcgatattgcc
gacacgcaaaaagacctgattgaaagcgcattccaagctcttaaacctaatggtgttttg
gtttactcaacgtgtacgcttagcaccgaagagaaccaacaagtgtgttatcacttaaaa
gagacctttggtgacgcggtagaatttgaatctctagaatccctgttcgacgacgcaaaa
gcaaccacgacagaagaaggctttctacacatttttccacaagtttatgactcggaaggc
ttctttgttgcacgtatccgtaaattagcgtctgttactccaccagaagttaaaaaacgt
atgggtaaattcccatttgaaaaagcatcaaagaaaactcagcaagaagtcgctgaacaa
ctgatgagcactctcgatatcgaattgccaagcgatactcaagtttggattcgcgacaaa
gacgtttggctattcccagaagcgctagaacctatgatcggtgagttccgtttttctcgc
atgggaattaagatcgccgaaacccataaaaaaggttaccgctggcagcaccaagtggcg
acaacgcttgcaacaggtaatgaagctaatgttgtcgagctaagtattgaagatgctcgt
gaatggttcatgggacgcgatgttcgccctgaaaacttgtcaggaaaaggtgaagtacta
gtgaagtacaatggtgcaatcatcggccttggtaagtgggttggtaaccgagtgaagaac
ggtttaccacgcgaactagtgcgcgataaaaaccttttctaa
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