Vibrio kanaloae: BTD91_16355
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Entry
BTD91_16355 CDS
T07086
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vka
Vibrio kanaloae
Brite
KEGG Orthology (KO) [BR:
vka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vka03000
]
BTD91_16355
Transcription factors [BR:
vka03000
]
Prokaryotic type
Helix-turn-helix
Other families
BTD91_16355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
AAA_2
HTH_30
AAA_5
AAA
Mg_chelatase
PAS_4
AAA_3
HTH_7
MCM
AAA_22
nSTAND6
HTH_22
HTH_28
HTH_23
HTH_Tnp_IS1
AAA_16
HTH_50
DUF2089
NUMOD1
HTH_29
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QPK06722
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Position
2:475681..477468
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AA seq
595 aa
AA seq
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MHLQQANTSDWLSSSWHRSTEAGLKQRRLPEDIRLPQSILKQRRHQSSDLINIVECNALP
LFNQMFARTDSRLILTDIEGVILASWGQERFKEKLTSIALSSGACWQEQLKGTNAIGTAI
VEAKPVSIIGEQHFIHQHRFISCSASPVFDHQGQMVGVLDITSEQQQHDSSVQLLVQNMV
QLVENQLLSHIPQGTTRIDLACEKSLLHSGWQGIVIANEAGEVVAHNQVASQLLDQTSIV
GECIDTLFNRTSLDTPFVFEKQHLKRPNAKRTRSISASCDLHHGEQQIEHAWQQANKVID
KGISLLILGETGVGKGEFVKALHKQSQRKSSPLVAVNCGALPKDLIESELFGYAPGAFTG
ASHKGFQGKIRQADKGILFLDEIADMPLEAQCRLLHVLQDKSVVPVGSNQSYQVDCQIIA
ATHKNLEQLVSTGEFRQDLYYRLNGLAFTLPSLQHRQDKHALIEHIHRKYAEDEQTICPH
LMSLLSAYAWPGNIRELDNLLKVAALLASDEPQLTLEHVPSHLAQHLTSLAHDNQHQLMT
PNTIKGTSNNDLRSTVEETLLQTYQANQGNISKTSRILGISRNTIYRKLKSLGIL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttcaacaagcaaacacctcagattggctttcgtcctcttggcaccgcagcaca
gaagcggggctaaaacagagacgacttcccgaagacattcgcctgccacaatcgattctt
aaacagcgacgacatcaatcttctgacttaatcaacatcgtcgaatgcaatgcgctgcct
ttgtttaatcagatgtttgcacgcactgacagtcgtttgattttgacggacattgaaggg
gtaattctggcaagttggggacaagaaaggtttaaggagaagctgacgtcaattgcactg
agctctggagcttgttggcaggagcaactcaaaggtactaacgcgattggcaccgccatt
gttgaagcgaaaccagtatccatcattggcgaacaacacttcatccaccagcatcggttt
atcagctgttcagcaagcccggtgtttgaccaccaaggccaaatggttggggtgttagac
attaccagcgagcagcagcaacacgacagttctgtccaattactggttcaaaatatggtt
cagcttgttgagaaccaactactgagtcacatcccacaaggcactactcgaatcgatctt
gcgtgtgagaaatctttactacacagtggttggcaaggaattgtgatagccaatgaagct
ggcgaggtagtcgcgcacaatcaggtcgcctctcagctgctggatcaaacctcgatcgtc
ggcgaatgcatagataccctatttaaccgaacctcattagatacgccttttgtgtttgag
aaacagcacctcaaacgaccaaatgcaaaacgcactcgctctatttcagcatcgtgtgat
ttgcaccatggtgaacaacagatagaacacgcttggcagcaagccaacaaggttatcgac
aaagggatcagcttgttgatcttaggagaaacaggggttggtaagggcgaatttgttaaa
gcattacacaagcaaagccaacgtaaatcgtcgcccttggtggcggtaaactgcggtgcg
ctgccgaaagaccttatcgaatctgagctgtttggctacgcgccgggcgcttttacgggc
gcaagccacaaaggattccaaggcaagatccgtcaagcagacaagggcattctatttttg
gatgaaatcgccgacatgccgttagaagctcaatgtcgattactgcatgttctgcaagat
aaatcagtggtgcccgtgggttcaaatcagagctaccaagtcgattgtcagatcatcgct
gccactcataaaaatctagaacagttagtttcgacaggtgagtttaggcaagacttgtac
taccgcttgaacggcttagccttcactttgccaagcctacaacaccgacaagacaaacac
gccttaatcgagcacattcatcgtaaatacgccgaagacgaacagacaatctgccctcac
ttgatgagcttactgtccgcttacgcttggccgggcaatatccgcgaattagataatcta
ctcaaggtcgcggctttactggcgagtgatgaaccacaactcacgctagaacatgtgcca
agccaccttgctcaacatctgacgtcattagcacacgataatcagcatcagctaatgact
cctaataccataaaaggtacatcgaataacgatttaagaagtaccgttgaagaaacctta
ttgcaaacgtatcaagcgaaccaaggcaacatcagcaagacttcgcgaatactcggcatc
agccgcaataccatttatcgaaaactgaaaagcttgggaattctttag
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