Varanus komodoensis (Komodo dragon): 123016653
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Entry
123016653 CDS
T07701
Symbol
POLR2A
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03020
RNA polymerase
vko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123016653 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
123016653 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vko03021
]
123016653 (POLR2A)
03400 DNA repair and recombination proteins [BR:
vko03400
]
123016653 (POLR2A)
Enzymes [BR:
vko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123016653 (POLR2A)
Transcription machinery [BR:
vko03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123016653 (POLR2A)
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123016653 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
123016653
NCBI-ProteinID:
XP_044273115
Ensembl:
ENSVKKG00000018697
LinkDB
All DBs
Position
Unknown
AA seq
1921 aa
AA seq
DB search
MHGGAPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEGGIKYPETTEGGRPKLGGLMDPR
QGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLGKTMKVLRCVCFFCSKLLVDS
NNPKIKDILTKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEEIAKEKGH
GGCGRYQPGIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFILGMDPK
YARPEWMICTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAH
VIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDF
SARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIR
DNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWST
FRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDT
LTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHIN
CIRTHSTHPDDEDSGLYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMG
HDVTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAH
NNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINI
SQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAM
GGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESV
EFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEEMVKDILSNAHIQNELEREFEKMKE
DREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINTRLPSDLHPIKVVEGVKELSKKLV
IVNGDDPLSKQAQENATLLFNIHLRSTLCSRRMIEEFRLSGEAFDWLLGEIESKFNQAIA
HPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTV
FLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVSEDQEWVNVYYEMPD
FDVTRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRI
MNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKII
ITEEGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERE
LYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLVE
AAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNFPGLGMGGPTGM
FFGSAPSPMGGLSPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPAY
SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGFTPQSPSYSPTSPS
YSPASPSYSPTSPNYSPTSPSYSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSP
TSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPS
YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS
SPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKY
SPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPEDSDED
N
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggagcgccctccggggacagcgcgtgcccgctgcgcaccatcaagcgcgtg
cagtttggcatcctcagcccggatgagatgaaacggatgtccgtcacggaagggggcatc
aagtaccctgagacgactgaagggggccgtcccaagctggggggcttaatggaccctcgg
cagggcgtcatcgaacggacaggaagatgccagacctgtgcaggcaacatgacagagtgt
ccgggccactttggtcacatcgagctggccaagccggtcttccacgtcggcttcttgggc
aagacgatgaaggtcctccgctgcgtttgctttttctgctccaagctgttggttgactct
aacaatccaaagatcaaagatatcctgaccaaatccaagggacagccgaagaagcgcttg
acccacgtctacgacctttgcaaaggcaagaacatctgcgaaggtggggaggaaatggac
aacaagttcggagtggagcagccagagggagacgaggagatcgcgaaggaaaagggccat
ggcggctgtggacgctaccagccgggaatccggcgctccggcctggagctgtacgccgag
tggaagcatgtcaacgaggactcgcaggagaagaagatcctgctgagcccggagagggtg
cacgagatcttcaagcgcatctcggacgaggagtgcttcatcctcggcatggaccccaaa
tacgcccggcccgagtggatgatctgcaccgtgcttccagtcccgccgctctccgtcagg
ccggccgtcgtcatgcagggctccgccaggaaccaggacgacttgacccacaaactggcg
gacattgtgaaaatcaacaaccagctgcggcggaacgagcagaacggagcggccgctcac
gtcatcgctgaggacgtcaagctgctgcagttccacgtggccaccatggtggacaacgag
ctcccggggctgccccgtgcgatgcagaaatcggggcgccccctgaagtccctcaagcag
aggctgaagggcaaggagggccgtgtgcgagggaacctcatgggcaagcgcgtggacttc
tcggcccgcacggtcatcacgccggaccccaacctctccatcgaccaggtgggcgtgccc
cgctccatcgcggccaacatgacctttgccgagatcgtgacgcccttcaacatcgacagg
ctgcaggagttggtgcgcagagggaacagccagtatcctggggccaagtacatcatccgg
gataacggcgacaggatcgacctccgcttccaccccaagcccagtgacctccacctccag
atcgggtacaaggtagaaaggcacatgtgtgacggggatatagtcattttcaaccggcag
ccgacactgcacaagatgtccatgatggggcaccgagtccgcatcctgccgtggtccacc
ttccgcctgaatctcagcgtgaccaccccttacaacgccgacttcgacggcgacgagatg
aacctgcacctgccgcagtccctggagacgcgggccgagatccaggagctggcgatggtg
cctcgcatgatcgtcaccccgcagtccaaccggcccgtcatgggcatcgtgcaggacacc
ctgacggccgtccgcaagttcaccaagcgggacgtcttcctggagcggggtgaggtcatg
aacctgctgatgttcctctccacctgggacggcaaagtgccgcagcccgccatcctcaag
ccgcgcccactctggaccgggaagcagatcttctccctgatcatcccgggccacatcaac
tgcatccgcacccacagcacccacccggacgacgaggacagcggcctgtacaagcacatc
tcgcccggggacaccaaggtcatcgtggagaacggggagctgatcatgggcatcctgtgc
aagaagtcgctgggcacctcggccggctccctggtccacatctcctacctggagatgggc
cacgacgtcacgcgcctcttctacagcaacatccagacggtcatcaacaactggctgctg
attgaaggccacaccatcggcatcggcgactccatcgctgacgcaaagacctaccaggac
attcagaacaccatcaagaaggccaagcaggatgtgattgaggtcatcgagaaggcccac
aacaacgagctggagcccacgccgggaaacacgctccggcagacctttgagaaccaggtg
aacaggatcctgaacgacgcccgagacaagacgggctcctccgcccagaagtccctctcc
gagtacaacaacttcaagtccatggtggtgtctggggccaaagggtccaagatcaacatc
tcacaggtcatcgcagtggtgggccagcagaacgtggaggggaagcggatccccttcggc
ttcaagcaccggacgctgccgcacttcatcaaggacgactacggtcccgagagcaggggc
ttcgtggagaactcctacctggccggcctcacaccgaccgagttcttcttccacgccatg
gggggcagagaggggctgatcgacacagccgtcaagaccgccgagacgggctacatccag
cgccggctgatcaagtccatggagtcggtgatggtgaaatacgacgccacggtgcgcaac
tccatcaaccaggtggtgcagctgcgctatggcgaggacgggctggccggggagagcgtg
gagttccagaacctggccaccctcaagccttccaacaaggcctttgagaagaagttcaaa
ttcgactacacgaacgagcgggctctgcggcgtacactgcaggaggagatggtgaaagac
attctgagcaacgcgcacatccagaacgagctggagagggaattcgagaagatgaaggag
gaccgggaggtgctgcgggtcatcttccccacgggagacagcaaggtggtgcttccctgc
aacctgctgcgcatgatctggaacgcccagaagatcttccacatcaacacccgcctgccc
tccgacctgcaccccatcaaagtggtggagggggtgaaggagctgagcaagaagctggtc
atcgtgaacggcgacgacccgctgagcaagcaggcccaggagaacgccacgctgctgttc
aacatccacctgcgctccacgctctgcagccggcggatgatcgaggagttccggctcagc
ggcgaggcctttgactggctcctgggcgagatcgagtccaagttcaaccaggccattgct
catccgggcgagatggtgggggcgctggctgcccagtccctgggcgagcccgccactcag
atgacgctgaacaccttccactacgccggcgtctcggcgaagaacgtgacgctgggagtg
ccccggctcaaggagctgatcaacatctccaagaagcccaagactccctcgctgaccgtc
ttcctgctcgggcagtcggcacgcgatgccgagcgggccaaggacatcctttgccgtctc
gagcacacgacgctgcgcaaggtgacggccaacacggccatctactacgaccccaacccc
cagaacacggtggtctccgaggaccaggagtgggtgaacgtgtactacgagatgccggac
ttcgacgtcacccgcatctccccctggctgctgcgggtggagctggaccgcaagcacatg
accgaccggaagctcaccatggagcagatcgcagagaagatcaatgccggcttcggggac
gacctcaactgcattttcaatgatgacaacgcggagaagctggtgctgcggatccgcatc
atgaacagcgacgagaacaagatgcaggaggaggaggaggtggtggacaagatggacgac
gacgtcttcctgcgctgcatcgagtccaacatgctgacggacatgaccctgcagggcatt
gagcagatcagcaaggtgtacatgcacctgccccagacggacaacaagaagaagatcatc
atcacggaggagggggagttcaaggcgctgcaggagtggatcctggagacggatggcgtc
agcctcatgcgcgtgctgagcgagaaggacgtggaccccgtgcgcaccacctccaacgac
attgtagagatcttcacggtcctgggtatcgaggcggtccggaaggcgctggagcgggag
ctgtaccacgtcatctccttcgacggctcctacgtcaactaccggcacctggcgctgctc
tgcgacaccatgacgtgccgcgggcacctgatggccatcacccggcacggcgtcaaccgc
caggacacggggcccctcatgaagtgctccttcgaggagacggtcgacgtcttggtggag
gcagccgcccacggcgagagcgaccccatgaagggcgtctcggagaacatcatgctgggc
cagctggcccccgccggcaccggctgcttcgacctgctgctggatgccgagaagtgcaaa
tatggcatggagatcccgaccaacttccccgggctgggcatgggggggcccaccggcatg
ttctttggatccgcccccagccccatgggaggcctgtctcctgccatgaccccctggaac
caaggtgccacgccagcctacggagcctggtcccccagtgtcggaagtggaatgaccccg
ggggcagccggcttttcgcccagcgcagcttctgacgcgagcgggttcagtcccgcctat
tctccagcctggtcgcccaccccaggttcacctggctctcccggaccatccagcccatat
attccatccccaggtggagcgatgtctcccagctattccccgacgtctcctgcctatgag
ccccgctcccctggaggattcaccccacaaagtcccagctacagccccacctcaccttcc
tacagtccggcgtctccctcatactctcctactagtccaaattacagccccaccagcccc
agctacagcccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntacagcccc
accagccccagctacagcccaacgagccccagctacagtccaacaagccccaattatagt
ccaacttctccaaattataccccaacttcgccaagttacagcccgacatcaccaagttac
agcccaacctcgcctaattacacaccaacttctccaaactacagccccacctcgcccagc
tattctcctaccagcccctcctacagccccacctcgcccagctactctccctccagccca
cgctacaccccacagtcacccacatataccccctcatcacctagctacagccccagctcc
ccgagctacagcccgaccagccccaagtacaccccaaccagcccatcctacagccccagc
tcgcctgagtacaccccaacctcgcccaagtacagcccgacaagtccaaagtacagcccc
acttcacccaagtacagccccacctctccgacctacagccccaccaccccgaaatacagc
ccgaccagccccacctactcgccgacgtcgcccgtctacacgccgacctcgcccaagtac
agcccgaccagccccacctactcgccgacgtctcccaagtacagccccacctcgccgaca
tactcgcccacctccccgaagggctccacgtactccccgacctctccgggctacagcccc
acctcgcccacgtacagcctcaccagccccgccatcagtccggaggacagcgatgaagac
aactga
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integrated database retrieval system
