Varanus komodoensis (Komodo dragon): 123016919
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Entry
123016919 CDS
T07701
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03030
DNA replication
vko03410
Base excision repair
vko03420
Nucleotide excision repair
vko03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123016919 (RFC1)
03410 Base excision repair
123016919 (RFC1)
03420 Nucleotide excision repair
123016919 (RFC1)
03430 Mismatch repair
123016919 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vko03032
]
123016919 (RFC1)
03400 DNA repair and recombination proteins [BR:
vko03400
]
123016919 (RFC1)
DNA replication proteins [BR:
vko03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123016919 (RFC1)
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123016919 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
RuvB_N
AAA_14
AAA_5
AAA_30
RNA_helicase
nSTAND3
AAA_16
AAA_33
AAA_17
AAA_7
AAA_19
NTPase_1
Motif
Other DBs
NCBI-GeneID:
123016919
NCBI-ProteinID:
XP_044273616
Ensembl:
ENSVKKG00000007729
UniProt:
A0A8D2J8G7
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
MDIRKFFGVVSSGKKHESDTAKKNEIPPNKDGTSDKKSKMKEIKMKNSSCEGDSKQKQVN
KKKRIIYDSDSEEEMQLAKKCKKPPDRKQSSNFNKASKKDPVVYVSETDEDDDFISKKTS
QKPKENGRSASIPLVTTGAPKANHKPKIKNKPLSPAKLTPISVTDYFGTGSIHRSEKKLV
SSKRKERSQSKDSTLNDEAIAKQLQLEENVEMERQLHEDEEFARTLAMLDETPKKKKPRK
EPEEKQIASVDKISTDEAEKNKQSHKVKPASSCFDAKPHSANDKINLEAHTESSVSTERK
DLVNKIMSSKVSSKLAVLKQKADSIKIENGTPEEESIKKESVTPKGKAPTKEKVSPQTSK
SVSPEDSEKKRTNYQAYRSFLNREGPKALGSKDIPQGGENCLEGMTFVITGVLESIERDE
AKSVIERYGGKVTGNVSKKTSYLIKGRDCGMSKCEKASALGTKIIDEDGLFDLIRNMPAK
KSKYEIAAEAEAKKMKSKWEKTPQKAATEKTKNSPLKKESEPKKKKSALEKEFTPKSSNK
EIVETRRGLNFDQKSLEKKHVPKDAESPIQEKSEGGAETLLWVDKYKPTSLKTIIGQQGD
QSCANKLLRWLRNWHTNTTEDKNVKSNKFGKKDEGGSWKAALLSGPPGIGKTTTATLVCE
ELGLSYVELNASDTRSKNSLKEIVAESLNNTNIKGFCSGTSSSVSTKHVLIMDEVDGMAG
NEDRGGIQELIDLIKHTKVPIICMCNDRNHTKIRSLAHYCFDLRFQRPRVEQIKGAMMSI
VFKEGLKIPPPAMNEIILAANQDIRQVLHNLSMWCAGNKSLTYDGVKEDAHKAKKDIKLG
PFDVVRKVFATGEETSHMSLIDKADLFFHDYSLAPLFVQENYIHVKPVAAGNNMKKHLML
LSKAADSICDGDLVDQQIRSRQNWSLLPTQAIYSSVLPGELMRGYMSQFPNFPSWLGKFS
STGKHDRIIQELSMHMSLRTHASKRAINLEYLPYIRDAIVRPLSHLGTEGVQDTIAFMDS
YCLMKEDVENIMEITSWGGKPSAFSKVDSKVKSAFTRTYNKEVHLTPYSLQIIQKAKWRA
GSVADGELDEGAEADEFQSEKEQEGVENDAMIKKTSAKQPTSERTEEKKKGKAKKKSK
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggatatccgcaaattctttggtgttgtaagttctggaaagaaacatgagtctgacact
gccaaaaaaaatgaaatccccccaaataaggatggaacttcagacaagaagtcaaaaatg
aaggaaatcaagatgaagaactcatcttgtgaaggagattctaaacaaaagcaggtgaac
aagaaaaagagaataatctatgattcagattctgaagaggagatgcaattggcaaaaaaa
tgtaagaagcctccagatagaaaacaatcttccaacttcaataaggcctcaaagaaggac
cctgttgtttatgtttcagagacagatgaagatgatgatttcattagtaaaaaaacttcc
caaaagcccaaggagaatgggagatctgcaagcattccccttgtaacaactggagcaccc
aaagcaaaccacaaacctaaaataaaaaataaacccttatctcctgcaaaactgacacca
atctctgtaactgattactttggaactggtagtatccatagatcagagaagaagttggtg
tcgagtaaacgaaaagagcgttcacaaagcaaggactcaacactaaatgatgaggctatt
gccaagcaactacagcttgaagagaatgtagagatggagagacagttacatgaagatgaa
gaatttgccagaactctggccatgttggatgagacaccaaaaaagaaaaagcctcgaaaa
gaacctgaagagaagcagatagcttcagtggacaaaattagtacagatgaagcagaaaag
aataagcaatctcacaaagtgaaacctgccagttcatgttttgatgcaaaacctcattct
gcaaatgataaaattaatctggaagctcatacggagtcttctgtcagtacagaaaggaag
gatttggtaaataagattatgtcatcaaaggttagctccaagttggcagtgctaaaacaa
aaagcagacagtattaaaatagaaaatgggactccagaagaagagagtatcaaaaaagaa
agtgtgactccaaaaggaaaagcacctacaaaggagaaggtctctccccaaacatctaag
tctgtaagtcctgaagattctgaaaagaagcgaaccaattatcaggcttatagaagcttc
ctcaatcgagaaggtcccaaagcacttggctctaaagacataccacaaggtggtgaaaat
tgcttggaaggtatgacatttgtgatcacaggtgtcctggaatctattgaacgtgatgag
gctaagtctgtaattgagcgctatggagggaaggtaactggtaatgtcagcaagaagacg
agctaccttattaagggtcgagactgtggtatgtccaagtgtgaaaaggcatcagcatta
gggacaaaaattattgatgaagatggcttatttgatctgattcggaatatgccagccaag
aaatccaagtatgaaatagcagctgaagcagaggcaaagaaaatgaaatccaagtgggag
aagaccccacaaaaagctgcaacagagaaaacaaaaaatagccctctgaagaaagagagt
gaacccaaaaagaaaaaatctgctcttgaaaaagaatttacccctaaatccagcaataag
gaaattgtggaaacaaggaggggtctgaactttgaccagaaaagtctggagaaaaagcat
gttccaaaagatgctgagagcccaattcaagaaaaaagtgaaggtggagcagagacatta
ttatgggtggacaaatacaagcccacatcccttaaaacaataattggacaacaaggtgac
cagagctgtgccaataaactcttgcgttggcttcgaaactggcatacaaatactacagag
gacaaaaatgtaaaatcgaataaatttggaaagaaagatgaaggtggtagttggaaagct
gctttactctctggtcccccagggattggtaaaacaaccacagctacattagtttgtgag
gaactgggtttgagctatgtggaattaaatgccagtgacactcgcagcaagaacagcctg
aaggaaatagttgcagaatcgttgaataacaccaacattaaaggattctgttcaggtaca
tcatcgtcagtcagtacaaaacatgtcctgattatggatgaggtggatggaatggctggc
aatgaggacagaggaggtatacaggaactgattgacctgatcaaacacacaaaggttcca
ataatttgcatgtgtaatgatcggaaccacacaaagatccgttccctcgcccattactgt
tttgacctccgctttcaaagaccacgtgtggaacagattaagggcgctatgatgtccatc
gtctttaaagaagggttaaagattccaccaccagcaatgaatgaaatcatcttggcagct
aatcaggatatcagacaagttttacataatcttagcatgtggtgtgcaggaaacaaaagc
ctgacttatgatggtgtgaaagaggatgcccacaaagcaaaaaaggatatcaagctgggc
ccttttgatgttgtcagaaaggtttttgctacaggtgaggagacctctcatatgtccctt
attgacaaagcagacctgttcttccacgattactctctagcaccgctctttgtccaggag
aactacatacatgtgaagccagttgctgccgggaacaatatgaagaaacatctgatgttg
cttagcaaagcagctgacagtatatgtgatggtgacttagttgatcagcagatccgcagt
cgacaaaactggagccttttacccacacaggccatttattcaagtgttcttcctggggag
ctaatgagaggctacatgagccaatttccaaactttccaagctggctgggaaaattttca
tcaacaggaaagcacgaccgcatcattcaagagttatcaatgcacatgagtctcaggaca
catgcaagcaagagagcaataaatcttgaatatttgccatacataagagatgcaattgtg
agacctttgagccacttgggaacagaaggagtacaggatactatagcattcatggattct
tattgcttgatgaaggaagatgttgaaaacataatggaaataaccagttggggaggcaag
cctagtgcattctctaaagtagattccaaagttaaatcagctttcacacgaacctataac
aaggaggtgcatcttacaccatattcactgcaaataatacagaaggcaaagtggcgagcg
gggtctgttgcggatggcgaactggatgaaggcgctgaagctgatgaattccaatctgag
aaggagcaagaaggtgttgaaaatgatgcaatgattaagaaaacgtctgctaagcaaccc
acctcagaaagaacagaagagaagaaaaagggcaaagcaaagaaaaagtctaagtga
DBGET
integrated database retrieval system
