Varanus komodoensis (Komodo dragon): 123016968
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Entry
123016968 CDS
T07701
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123016968 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123016968 (FIP1L1)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123016968 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
123016968
NCBI-ProteinID:
XP_044273771
Ensembl:
ENSVKKG00000018047
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MSAGGEVERLAADLSGAGAGDEEEEWLYGDENEEERPEDTPASAPPPTGNEEEAAAENGV
AKTKVTETEDDSDSDSDDDEDDVQVTIGDIKTGAPQYGYGAAPVNLNIKTGGRSYGSSGA
KVKGVDLDAPGSINGVPLLEIDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKR
IRMGLEILPVTSTTNKIMAEDFSMEVTPGTEIPDGTYNLFKVQQGRTGNMEKEIPLPPPK
AEFTSPPPLFKTGIPSNRNSTSSQSQTSTAARKASSGIGKWQERYGRAESPELRRLSGTI
DVIGQTITISRVEGRRRANENSNIQVLSDRSSTDVDSSFSKPPPFFPPGAPPTHLPPPPF
LPPPPSVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLIPTIESGHSSGYDSRSARAFP
YGGVRLWCPSSKNEATVKWEEYVAVNEQTRVLIQSPFRTLQVLHHRGVASWTQANNGTII
QEEIRTENGREIETEKEIVIVTGNESVTETESGSGTTVQLLVCSTVMRNDIGTENMQTEA
MSGIEQAERKKSDTEKGDIEKRKKQDTSHHEATAGAAMTAKKETATGGTNTKSLKRAKKE
KKQVVVNLPLNRKTLKLPLQNRHM
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggaggcgaggtggagcgactggcggcggacctgagcggggccggcgccggg
gatgaggaggaggagtggctctatggcgatgagaatgaagaggaaagaccagaggacaca
ccagccagtgctccacccccaactggaaatgaggaagaagctgctgctgaaaatggtgta
gcaaaaacgaaagtgacagaaactgaagatgatagtgacagtgatagtgatgatgatgaa
gatgatgttcaggtcactataggtgatattaaaacaggagctccacaatatggctatgga
gcggcaccagtgaatctcaatattaaaacaggggggcgatcttatgggtcttctggggca
aaagtcaaaggagttgatcttgatgcaccaggaagcattaatggtgttcctctattagaa
attgatttggattcctttgaggataagccttggagaaaaccaggtgctgatctctcagac
tattttaattacgggtttaatgaagacacctggaaagcatactgtgaaaaacaaaagagg
atacggatggggcttgaaattttacctgttacctctactacaaataagattatggccgaa
gacttttctatggaagtaacaccagggacagagattccagatggcacatacaatcttttt
aaggtgcaacagggcagaactggaaacatggagaaagaaataccacttcctccacccaaa
gctgagttcacttctcctccaccgttattcaagacaggaatcccatcaaacagaaacagc
acctcttctcagtcgcagacgagcactgcagccagaaaagccagttcaggcattgggaaa
tggcaggaacgatatgggagagctgagtcacctgaactaagaaggctttctggtacaata
gatgtgattggacaaaccatcacaattagccgagtagaaggaagaaggagggccaatgaa
aacagcaatatacaggttctttctgaccgttccagtactgatgtggacagcagtttttcc
aagccccctccattttttcctcctggagcgcctcctacccatcttccaccacctcctttt
cttccaccacctccatctgtcagtactgcaccccctctgattcctcctccaggtatacca
ataactgtgccacctccaggctttccacccccacctggaggtccgccaccttcccttata
ccgacaatagaaagtggacattcctctggttatgacagccgctcagctcgtgcatttcca
tatggtggtgtgcgtctgtggtgtccaagcagcaagaatgaagctacagtaaaatgggag
gagtatgtggctgtgaatgaacaaaccagagttttgattcagtcacctttccgcaccttg
caggttctgcaccatcgtggagtagcctcatggacacaagcaaacaatgggactattatt
caagaagagataaggacagagaacgggagagagatcgagacagagaaagagatcgtgatc
gtgacagggaacgagagcgtaaccgagacagagagcgggagcgggaccacagtccaactc
ctagtgtgttcaacagtgatgaggaacgatataggtacagagaatatgcagacagaggct
atgagcggcatagaacaagcagagagaaagaagagcgacaccgagaaaggagacatcgag
aaaaggaagaaacaagacacaagtcatcacgaagcaacagcaggcgccgccatgacagcg
aagaaggagacagccacaggaggcacaaacacaaaaagtctaaaaagagcaaagaaggaa
aagaaacaggtggtggtgaacctgcccctgaacaggaaaacactgaagctgcccctgcag
aataggcacatgtga
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