Varanus komodoensis (Komodo dragon): 123016975
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Entry
123016975 CDS
T07701
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vko03041
]
123016975 (DDX1)
03016 Transfer RNA biogenesis [BR:
vko03016
]
123016975 (DDX1)
Enzymes [BR:
vko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123016975 (DDX1)
Spliceosome [BR:
vko03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123016975 (DDX1)
Transfer RNA biogenesis [BR:
vko03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
123016975 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
123016975
NCBI-ProteinID:
XP_044273814
Ensembl:
ENSVKKG00000005673
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGGGVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRSTKGVTKGKYYYEVSCRDQGLCRVGWSSMQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTIGCYVDLDKGQIAFSKNGKDLGLAFEIPPHLKNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYIALDKAPESNSVKSQHTGTAQVAQTKQLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAAREQLSVLEQGVDIVVGTPGRLDDLVSTGKLV
LSQVRFLVLDEADGLLSQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDKLWEKLGKNHIRTDEVHAKDNTRPGAN
TAEMWSEAIKILKGEYTIRAIKEHKMDQAIIFCRTKIDCDNMEQYFMQQGGGPDRKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDITGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAVSLVATEKEKVWYHSCPSRGKGCYNTRLKDEGGCTIWYNEMQLLG
EVEEHLNCTISQIEPDIKVPVDDFDGKVTYGKRRAAGGGTYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctcggaaatgggtgttatgccagagatagctcaagctgtagaggagatg
gactggcttcttcccacggatatccaagcagagtccattccattgattttaggaggtggt
gatgtacttatggctgcagaaactgggagtggaaaaactggtgctttcagcatcccagtt
attcagattgtttatgaaactctgaaggaccagcaggaaggcaaaaaggggaaaactact
ataaaaactggtgggggagtgctcaacaaatggcaaatgaatccatatgatagaggatct
gcatttgctatcgggtctgatggtctgtgctgccaaagcagagagataaaggaatggcat
ggatgcagatcaactaaaggcgtgactaaaggaaaatattattatgaagtgtcatgtcgt
gaccaagggttatgcagagttggatggtcctcaatgcaagcttcgttagatttaggcaca
gacaaatttggctttggctatgggggaacaggaaagaaatctcataacaaacagtttgat
agttatggagaggaattcactatgcatgacacgattggatgctatgtagatcttgataaa
gggcagattgcattttctaaaaatggaaaggaccttggactggcatttgagatcccacca
cacctaaaaaaccaagcactctttgcagcttgtgttctaaagaatgctgaattgaaattc
aactttggtgaagaagactttaagtttccacccaaagatggctacattgctcttgataag
gctcctgagagtaactctgtgaaatcccagcatacaggaactgcacaagtagcacaaaca
aaacaactgccaaatgctcccaaagccttgattgtggaaccatccagagaactagcggag
caaactctgaacaatgtgaaacaattcaaaaaatacgttgataatcctaagttaagggaa
ctcttaattattggtggtgttgctgcaagagagcaactgtcagtattggagcaaggggta
gacatagttgtgggaactcctggaagattggatgatcttgtgtcaacaggaaaactggtt
ttatctcaggttcggttcctggtccttgatgaggctgacggcctccttagccaaggctat
tcagatttcattaacagaattcactctcagattcctcagatcacatctgatggaaagagg
ctccaggtaattgtgtgctcagcaactctgcattcatttgatgtcaagaaactatctgaa
aagattatgcacttccccacttgggtggatttgaaaggagaagattctgtcccagatact
gtgcaccatgttgttgttcctgtaaaccccaaaacagacaaactgtgggaaaagcttgga
aaaaaccatatccgaactgatgaagtgcatgcaaaagataatacaagacctggcgctaat
actgcagaaatgtggtcagaagctattaagattttgaaaggagaatacaccattcgtgct
atcaaggaacacaagatggatcaagcaataatcttctgcaggactaagatagattgtgat
aacatggagcaatacttcatgcagcaaggaggaggtccagataggaaggggcatcagttc
tcatgtgtctgcctgcatggtgaccgaaaaccacacgagaggaagcagaatttggagcgt
tttaagaaaggagatgtccgattcttgatctgcactgatgtagctgctagaggaattgat
atcactggtgttccttatgttatcaatgtcacacttccggatgaaaaacagaactacgtt
catcggattggcagagtgggaagagcggaacgcatgggtttggccgtttccttagtggca
acagagaaagaaaaggtttggtatcattcatgccccagtcgtggaaaaggctgttataat
acaaggctgaaggatgagggcggttgcaccatttggtacaatgagatgcagctgttgggt
gaggttgaagagcacctgaattgtacaatttctcagatcgagcctgatattaaagtccca
gtggatgattttgatggcaaagtcacttatgggaaaaggagagctgctggtggtggaact
tataaaggccatgtagatatcttggcacctacggtgcaagagttggctgcccttgagaag
gaagctcagacatctttcttgcatcttggctaccttcctaatcagctgtttcgaacattt
tga
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