Varanus komodoensis (Komodo dragon): 123017077
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Entry
123017077 CDS
T07701
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123017077 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vko03041
]
123017077 (PRPF40A)
Spliceosome [BR:
vko03041
]
Complex A
U1 snRNP components
U1 related factors
123017077 (PRPF40A)
Complex B
123017077 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
123017077
NCBI-ProteinID:
XP_044274124
Ensembl:
ENSVKKG00000016641
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MWSEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQMLSKCPWKEYKSDSGKPYYYNSQT
KESRWAKPKELEDLEAMIKAEENSGKPEESVPTSAAAVAPGVPNAGTTVPETPAAAPSAP
SAPAVASAPEAEAPSVATVVENENRVAASTDEQVQPPAPVVQEQMAEVVTNSVEEAPKQE
SSDVTPKKEEEDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRY
SALAKLSEKKQAFNAYKVQTEKEEKEEARLKYKEAKESFQRFLENHEKMTSTTRYKKAEQ
MFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYCT
TWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKGLLRERRRQR
KNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFYVEDL
KARYHDEKKIIKDILKIVLQDKGFVVEVNTTFEDFVTVISSTKRATTLDAGNIKLAFNSL
LEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDIT
LESERKRIFKDFIYLLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESEDDDSHSKKK
RQRSDSRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDADRERDKKERENEKE
RSRQRSESKHKSPPKKRPGKDSGAWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcagagcataaatcaccagatggaagaacatactattacaatactgagacaaaa
cagtccacttgggagaaacctgacgatctgaaaacacctgcagagcaaatgctatcaaaa
tgtccatggaaggagtataaatctgattctggaaagccttactactacaactcccagaca
aaagaatcacgttgggcaaaacccaaagaacttgaagaccttgaagcaatgattaaagca
gaagaaaacagtggtaaaccagaagaatcggttccaacatctgctgcagctgttgcacca
ggagttccaaatgctggcaccactgttcctgaaactcctgcagctgcaccatcagccccc
agcgctcctgctgttgcatcagctcctgaagctgaggcgccttctgttgctactgttgtg
gaaaatgaaaatagagtcgctgcttcaactgatgagcaggtacagccgcctgctcctgtt
gtacaggaacaaatggcagaagttgtcacaaattctgtagaagaagctcctaaacaggaa
tcctcagatgtcacccccaaaaaagaagaagaagatgctcaacctgttaaaaaaacctat
acctggaatacaaaagaagaagcgaagcaagcatttaaagaactattgaaagaaaagcgt
gtgccgtccaatgcctcttgggaacaagctatgaaaatgataattaatgatccaagatac
agtgctttggcaaagctaagtgagaaaaaacaagcatttaatgcttacaaggtccagaca
gagaaagaagaaaaagaagaagcaagattaaaatataaagaagcaaaagagtcttttcag
cgtttccttgaaaaccatgagaagatgacatccacaaccagatacaaaaaagctgaacaa
atgtttggggaaatggaggtctggaatgcaatatcagagcgtgatcgtcttgaaatctat
gaagatgtcctattctttctatcaaaaaaagaaaaagaacaagccaagcagttaaggaag
aggaactgggaggcattaaaaaatatcctggacaatatggctaatgttacatactgtact
acatggtcagaggctcagcaatatctgatggataatcctacatttgcagaggatgaagaa
cttcaaaatatggataaggaggatgcattgatttgttttgaggaacacataagggctctg
gaaaaggaggaggaggaagagaaacagaaaggcttactcagggaaagacgaagacagcgt
aaaaacagagaatctttccagatatttttggatgaattgcacgaacatggccagttgcat
tcaatgtcatcatggatggagttatatccaactataagttctgacattaggtttactaac
atgcttggtcagcctggctcaactgctcttgatcttttcaagttttatgttgaagatcta
aaagcacgctaccatgatgaaaaaaaaataataaaagacatcttaaagattgttttgcag
gataaaggatttgtggttgaagtgaatacaacatttgaagattttgtcacagtcatcagt
tcaactaaaagagctacgacattagatgctggaaatatcaaactggctttcaatagtctg
ttggaaaaggcagaagcccgtgaacgcgagagagagaaagaagaagctcgcaaaatgaaa
cggaaagagtctgcctttaagagcatgctaaaacaagccacacctccaattgaactggat
gcagtatgggaagatattcgagaaagatttgtgaaagaaccagcatttgaagacatcact
ctagaatcagaaagaaaaagaatatttaaagacttcatttatttactagagcatgagtgt
cagcatcatcattcaaagaacaagaagcattctaaaaaatcaaaaaagcatcacagaaag
cggtcccgctctcgttcgggttcagaatctgaggatgatgacagtcattccaaaaaaaag
aggcagcgctcagactcacgatcagtttctgaacgttcttccagtgcagaatctgaaaga
agctacaagaagtctaagaaacacaaaaagaagagcaaaaagaggaggcacaagtctgat
tcaccagaatcagatgcagatcgagaaagagacaaaaaagagagagagaatgaaaaggaa
agaagtagacaaagatctgaatctaagcataaatcacctcctaaaaagagacctggcaaa
gattctggcgcttgggatacttctggtagtgaattaagtgaaggtgaattagaaaaacaa
aggagaaccctcttggaacaactggatgaagatcaataa
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