Varanus komodoensis (Komodo dragon): 123017135
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Entry
123017135 CDS
T07701
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vko03021
]
123017135 (TAF1B)
Transcription machinery [BR:
vko03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
123017135 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
123017135
NCBI-ProteinID:
XP_044274209
Ensembl:
ENSVKKG00000006234
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MEEEEARDYNEPCVECSVVSWGITEEGKFYCRSCHTVIERTREVLTGDVTSNARAQSISR
GLKKKNKLDKGWEWYVCEGFQYILWKQAEALQSLGVSSQMKDGVLANFWRRYLQKSKQAY
CDKPFSDATYSTSPKQLQSTDTEEEPDFIKLLDLVSSATDTDLLSESSIGGISSSKISEK
SVWSGSVDGSSYIGKRKKGDMRMSMPMTLAFCYLALLWLRESITLSDLLRLVMDGHIPYL
NAYKDFPEKMKMYGADFKIFHVQSWPTYEEVHKKMHALVNYIELPCFPEITNSSFLHPNI
LCIKYLMELNLPDDMHSWTCRVVKKTGVGETDFLTLHPGNKSSQKVKYDILAMAVIVVVL
KILYLLDDQYEWQLANYAEEENENNEEGRPVFNIRKWYFVVKNTLDLEQKKFNEKKIRYL
WRCEKPLLYTAREMSVVLKKRQMVVDLQRQFRALSGSTEPTEKPTPSIFQLNWTNENTAQ
NCFHGHSLAGVLQQKGSIFTTLNTNYWLCTTKLCKERVCGHLAHYRESDFPHTYQFVLNL
FAFLLRVKPSLIHEEVCAIEHKLFHSRFHKKYRIFKVHKSGKS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaggaggcgagagactacaatgaaccttgtgtggaatgttctgttgtcagc
tggggtattacagaagaaggcaaattttactgcagatcttgccacactgttatagaaagg
actagagaagttttaactggcgatgttacttcaaatgctagggcacagtctatctctcga
ggactgaaaaaaaagaataaacttgataaaggctgggaatggtatgtctgtgagggtttt
cagtatattctctggaagcaagctgaagcattgcaatctttaggagtttcttcacagatg
aaggatggtgttctggctaacttttggagacgataccttcagaagagcaagcaggcttat
tgtgacaagccttttagtgatgctacgtacagtacttcaccaaaacagctacagagtaca
gatactgaagaggagccagattttattaaacttcttgacttggtttcctctgcaactgat
acagatttgttgtctgaatctagcattggaggaatttcatctagcaaaatatctgaaaaa
tctgtctggtctggatcagtggatggtagctcatacatagggaaaaggaagaaaggagac
atgagaatgtcaatgccaatgaccctggccttctgctatttggcattgctctggctgaga
gaatcaataacattatcagatctcttaagactggtaatggatggtcacattccttacttg
aatgcttataaagatttcccagagaagatgaagatgtatggggctgatttcaagatcttt
catgtacagtcctggccaacatatgaggaggttcataaaaaaatgcatgctcttgtaaat
tatatagagctaccttgttttccagaaataacaaacagtagcttccttcatccaaacatt
ctctgcatcaagtatttgatggaacttaacttgcctgatgatatgcacagttggacttgc
agggtagtaaaaaaaactggcgttggtgaaacagacttcttgacgcttcatccagggaat
aaatcatctcagaaagtgaaatatgatattcttgctatggctgttattgtagtagtattg
aaaattctgtacttgctggatgaccaatatgagtggcaactagcaaactatgctgaagaa
gaaaacgagaacaatgaagaaggcagaccagtgttcaatattagaaaatggtactttgtt
gtaaagaacactttagatttggagcagaagaaatttaatgaaaaaaaaatcaggtattta
tggagatgtgagaagccactattatatacagcaagggaaatgtctgttgttctcaagaaa
aggcaaatggtagtggaccttcaaaggcaattccgtgcactttctggctccacagaacct
acggagaagccgacaccttccattttccagctgaactggactaacgaaaacacagcacag
aattgttttcatggccacagtcttgctggagttttgcaacaaaaaggcagtatatttaca
actttgaatacaaactattggttgtgtacaactaaactgtgcaaagagagggtgtgtggc
catctggcacactatagagaatcagattttccccatacctaccagtttgtgttaaatctt
tttgccttcctcctgcgggtgaagccctccctcatccatgaagaagtgtgtgccatagaa
cataaactctttcactcacgctttcataagaaatacagaattttcaaagttcataaaagt
ggaaagtcataa
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