Varanus komodoensis (Komodo dragon): 123017263
Help
Entry
123017263 CDS
T07701
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vko04131
]
123017263 (SH3TC1)
Membrane trafficking [BR:
vko04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
123017263 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_8
TPR_19
SH3_1
SH3_2
TPR_10
TPR_1
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
123017263
NCBI-ProteinID:
XP_044274455
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MATGEEDFSASISSCDAFTEVKNSCSVEPKQRTSQEENTELPGESYQQKDISLKLIMVKC
KTGLPDSQLQGYLRGRLRLLENDSKKARAVFNELSARLLSIHSEDHLIVVTFWTFEEIWK
FATYYSLGFLNDCMENLLLDDYLWLSLPEEAVRIDVHLDEECLDMIYRRLLTQEGTFFVY
HPENVESGKKAADDREAVRIYQLKCTATERAPEAREWNDLPKDFSVPLIAFHQWFLKTIA
DPVGFSRKMEPTVTDQTATGFSIAIISHESTVPDEIGFQKGDKIEIIGYFVKCMEWFVGR
HVPTGQVGFVQSSHVKPDDFKATLTELPYLASLKDEHSFLTREKALLEVNVMKLLAQTPK
DNICNTYQMDGQEPFEKPTEQETPQTFLNETCSTIKYKVAQALMRRKNVQMHKEETDVQK
RQFSALNGEMPSVSQEPHFCVYQDVCYGPEICNSILLFLNGKSYDTHFKKLYDFSFSFLN
TLFYGYANEEELINYFVLAREAAKQASLTWALTRLCYLLGRMSLRKFKLSQARVYFEEAL
ATIQGDFSDLYLITTLYTNLTGIYLKQKNKEKCIGLLDKVASLLMGIPSYISSTDMESDI
LKYALKRAVLSQSKNAEARACLLLAKHYLNFKQGEEALPFLERLQILNNELGLQNDSLSI
DCYFKLGQLYSQKCLPHLVLSCVRVASSCGSCTLLELFRSIDLVLTNAPKLHSLKPVGHK
HPSQIAYYLRRLLHLLETSKEHQKLCSMVYCNLSVLYSHHKQYRKAIDYMEKVLDTNADI
SIEEMINYVVFLGWLYLLHGQNTVALDILNTIVESSQSSHPQLGVIYNMIAICLRRMKIT
KQAAENYCKALSISREMRSIHNQAVALANLGILCLHSDARSLAEHFLIKAMKLFSELPSV
ESGKDFIDILLRLGCYYANGVYKDKGRCYYEWAFLVAMETNHLEGQLQAVQYLCQFYSTV
LPDEAQCVIYNEYQLSLVRKMSDKVMEGQILETISQLYLSLGTERAYRFALEYTKRSLGI
FIDLQEKQREAQAWLQAGKIYYILRQNELVDLYIQVAQNAALCTEDPNLEMEVFESSGDI
FFNGDREKEKAVPFYRDKALPIAVKTRNSCAELRLFNKLVGVLFALKAYEECLRYAQASL
MLSVNLGNQLNERIAYHRLAVIYHHLGQCELTEHFFLKALSLCPSPLEFDEEALYYVRVY
LVLGDITFYDLKDPFDAAGYYNLALAAAMGLSNKKAQLKIYTRLAIIYHNFLVDREMSLF
FYQKARAFATELNIRRINLSPDQSTRAAWAPVKKIM
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggcaactggggaagaagatttcagcgcatctatttcttcctgtgatgcttttacagag
gtaaaaaattcttgttccgtggagccaaagcaaagaactagtcaggaagaaaacacagag
ctaccaggggagagctaccagcaaaaagatatatccctgaagctaatcatggtaaagtgt
aagactgggcttcctgattctcagctgcaagggtatctgagaggacgtctccgtcttctg
gagaatgacagcaaaaaggccagggcagtttttaatgaactatctgccagactactatcc
attcacagcgaagaccatctaatagtggtaacattttggacctttgaagaaatctggaag
tttgcaacctattattctcttggttttttaaatgattgcatggagaatctgttgctagat
gactatttatggctctctctgccagaggaagcagttagaattgatgtccatctagatgaa
gaatgtcttgatatgatatacagaaggctgttaactcaagaaggtaccttctttgtatat
catcctgaaaatgttgaaagtgggaaaaaagctgcagatgatagagaagcagtgagaatt
taccagctgaagtgtactgctactgagagagctccagaagcaagagagtggaatgaccta
cctaaagacttttcagtccctctaatcgcttttcatcagtggtttcttaaaacaatcgca
gaccctgttggtttttccagaaaaatggaacctacagtcactgatcaaactgctacagga
ttttctatagcgattattagccatgaaagtactgtgcctgatgaaattggtttccagaaa
ggagacaaaatagaaattattggctactttgtgaagtgcatggagtggtttgtgggaaga
catgtccctactggccaagttggctttgtacagagcagtcatgttaaacccgatgatttc
aaggccactctaactgaacttccatacctggcttccttgaaagatgagcattctttttta
acaagagaaaaagcccttttggaagtaaatgtgatgaagctgttggcgcaaacaccaaaa
gataacatttgcaatacatatcaaatggatggacaagaaccttttgaaaaacccactgag
caagagacaccacagaccttccttaatgaaacttgtagcacaattaaatacaaagtggca
caggcgctaatgagaaggaaaaatgtacaaatgcacaaagaagagacagatgttcagaaa
aggcagttctctgctttgaatggagagatgccttctgtttcccaagaaccacatttctgc
gtatatcaagatgtatgctatggtccagaaatctgtaattcaatattattgtttctgaat
ggtaaaagctatgacacccacttcaagaagctatatgacttctcattttcctttctgaac
accttgttttatggttatgccaatgaggaagaactgattaattattttgtactggcaagg
gaagcagcaaaacaagcaagtctgacttgggctttgacacggctgtgctatctcctggga
agaatgagtttacggaagttcaaactttctcaagctcgagtttattttgaagaagctttg
gcaacaatacaaggcgattttagtgacctttaccttataactactctttatacaaatcta
acaggcatctacctaaaacagaagaataaagaaaaatgtattggccttttggacaaggtt
gcttccttgcttatgggaattcccagctatattagcagcacagatatggagtcagatatt
ctgaagtatgctttaaaaagggcagtgctgagtcaaagcaagaatgcagaagccagagcg
tgcctcctattagcaaagcactatctgaactttaaacaaggtgaagaagcacttccattc
ctagaaagactacagatactgaataatgaattgggtttgcagaatgactcattgtcaatt
gattgctattttaagctagggcaactctatagtcaaaagtgtttgccccaccttgtgcta
agctgtgtcagggttgcctcttcttgtggctcatgtacattgctggaattattccgaagc
attgatttagtactaacaaatgctcctaaactccatagcctaaaacctgtagggcacaaa
catccctctcaaattgcatattatctcagacgcttgctccatttgctagaaactagcaaa
gaacaccaaaaactctgcagcatggtttactgtaacctttctgtactatacagccatcac
aaacaatatagaaaagcaattgactacatggagaaggttctggacacaaatgcagatata
agtattgaagaaatgattaactatgtagtctttctcggttggttatatcttctgcatgga
caaaacactgtagctctggacattctaaatacaatagtagagtcttcacagagcagtcat
ccacagttgggtgtaatttataatatgattgcaatttgtttgagacggatgaaaattaca
aagcaagctgctgagaactattgtaaagctctgagcatatcaagagagatgagaagcata
cataatcaggctgttgctttggccaacctggggattctctgtctgcattcagatgccaga
agtcttgcagagcatttcttaattaaagcaatgaagttgttctctgaactgccaagtgtt
gagtctggaaaggatttcatagacattctcctcagactggggtgctattatgccaatgga
gtttataaagacaaagggagatgctattatgaatgggcatttttggtggcaatggaaaca
aatcatttggaagggcagctccaggccgttcagtatctatgccagttctacagtacagtt
cttccagatgaagctcagtgtgtcatctacaatgaatatcaactctccttagtaaggaaa
atgtctgacaaagtaatggagggacagatattggaaaccatcagtcagctgtatctgtct
ttaggcaccgaaagggcatacagatttgccctggaatacaccaagagaagccttggaata
ttcattgatcttcaggaaaaacaaagggaagcacaggcttggctccaagcaggaaaaata
tattatatattgaggcaaaatgagctggtagatctttatatccaggttgcccaaaatgct
gctttgtgtactgaagatcctaatctagaaatggaagtgtttgaatcttcaggagacatc
ttttttaatggagaccgagaaaaggaaaaagcagtgcccttctacagggacaaggcactg
ccaattgctgttaagacaaggaacagctgtgctgagcttcgactattcaacaaactggtg
ggagtgctgtttgctctgaaggcatatgaggagtgtctgagatatgcgcaagcatcatta
atgctcagcgtcaatctagggaatcaattaaatgaaagaatagcatatcatcgactagct
gttatctaccaccatctagggcagtgtgaacttactgaacactttttcttaaaggccttg
tccctctgtccctcaccccttgagtttgatgaggaagccctatactatgtaagagtatac
cttgttcttggagacatcactttctatgatctaaaggatccctttgatgctgctggctac
tataatttggctcttgcagctgccatgggcttgagcaacaaaaaggctcaactgaagatt
tacacaaggctcgcaataatctaccacaacttccttgtggatcgagagatgtccctcttc
ttctatcaaaaggcaagagcctttgcaactgaacttaatattcgtagaataaatctgtca
cctgatcaatctacgagggcagcctgggcacctgtgaaaaagatcatgtga
DBGET
integrated database retrieval system
