Varanus komodoensis (Komodo dragon): 123017297
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Entry
123017297 CDS
T07701
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123017297 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123017297 (NUP98)
03036 Chromosome and associated proteins [BR:
vko03036
]
123017297 (NUP98)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123017297 (NUP98)
Chromosome and associated proteins [BR:
vko03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123017297 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
123017297
NCBI-ProteinID:
XP_044274492
Ensembl:
ENSVKKG00000014628
UniProt:
A0A8D2Q695
LinkDB
All DBs
Position
Unknown
AA seq
1800 aa
AA seq
DB search
MFNKSFGTPFGSNTGGFGTTSAFGQNAGFGTTSGGAFGASAFGSNNNTGGLFGTAQTKPG
GLFGSSTFSQPATSSTSTGFGFGTSTGTSSGLFGTASTGGGLFSSQNNAFAQNKPVGFGN
FGTSTSSGGLFGTTNTTSNPFGGTSGSLFGSTSFATVPTGTTIKFNPPTGTDTMVKSGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGATPGLFGSSTATSSAAT
GLFGSSTTNAGFSYGQNKTGFGTSASGFGTGAGSLFGQTQQTTGLFNKPFGQATTAQNAS
YSFGNTLGQPSTSTMGLFGATQPSQPGTLFGTAANTNTATGFGTGTSLFGQTNTGFGVGS
SSLFSNKPAGFGTTTTSAPTFGTTTSGLFGFGANNTGNSLFGNKPAAGTLGTGLGTGFGT
VLSAGQTSLFGNTQPKLGSTLGTGAFGASGFNTSAASLGFGAPQPAVALTDPNASAAQQA
ILQQHLNSLTYAPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPATR
VRPKALQTTGSSKSHLFDGLDDDEPALSNGAFMPKKNIKKLVLKNLNSSSLFSPASGEVD
ELASPSEYPESGERFNFLSRSIDENHRQEGELEEEEGPPREASRFFASPLGKPLPQTPDS
TTYKAHGGADDTILALNVRPALRNGLEGSREEASYREESLQDEHEEEVEHRHSAHPAGIV
LVRVGYYTIPSMDELAKMTNDKGECIVTDFTIGRKGYGSIYFEGEVNLTSLNLDEIVHIR
RKEVIVYPDDELKPPVGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMNYEGRLEAV
SRKQGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHSSKVEAKKLKTAQVPPPGQL
VAQQMALSGKPAPSSKSSDVEPLGRVVELDSNMADVTQEPAQDFAAEETLAEEQEPMAAS
THIASALDINPHTLQIMKASLLVDEEDLDLILDRRFGKQAAAADASQEICSPRLPISALT
QGRKSRPSAAGLLPSRLPSGSLLLPSAALQGSCSPRTSSLGAAVPAPPWSAIPSLASVLT
VPSPAPDVPLKTVGIRRHLGLVPLEKSVTCGKGRLLKDMALFMGRSFRVGWGPSWVLVHS
GEQLSSPPEPEEPQDESMEYGFLPTPVAPKQLSESPFKVHVEKLSLERRAAGRRLQAFLP
PLEIKLKHSTVHLDEPCPLLTPCPGVAAIHEYARWATETCGGPEEVEAVVKDWCLVWTLG
EALWGHLKELEARLDEPSEYIVALQRRGAFSRWLSQAAALRIQDEVALSQKDSAAEAVFS
CLTGKQISEACRLAQESGDHRLALLLSQLAGSQEVRELLALQLTDWQQLQADAFIQEERL
RIFALLAGKPVWPLSERRTVNVCSQLDWKRCIGIHLWYLLPSTAPLSAALSMYEAAFQDS
VEGDRYACPPLPPYLEGSGCVLEEGDAQQPLRDVCFHLLKLYSDRCYDLHQLLDPRSITA
DPLDHRLSWHLWEVLRALNYTHLSEQRQGVLSASYAAQLESEGLWEWAVFVLLHTPDAHT
RERAVRELLSRHCTLSETPESWEEEAFLTEKLCVPPAWIHEAKATRARMEGDKHKEALYL
FKAGHWNQCHRLVIRHLASDCIINEKYAYLKGFLEDLAAPERSTLIQDWDTAGLVFLDYT
QVIEMLHRIQQLDCSGYELEELHAKVISLCSRIELVQCHSAKDRLAQSEMAKRNADILRA
VLRLQHPPEPAPGGFLDTQRVPLRLLAPHIGRLPMPEDYALEELRGLTQSYLRELTVVAQ
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcgtttggaacaccttttggtagcaacacaggcggttttgggacaact
tcagcttttggacagaatgctggctttggcacaaccagtggaggagctttcggagcatct
gcgtttggatcgaacaacaacacgggcggactctttgggacagcacagaccaagccaggt
gggctgtttggatcgagtacctttagccagccagccacctcatccactagcaccggattt
gggtttggaacatcaactggaacgtccagtggcttgttcgggacagcaagcaccggtgga
ggcctcttctcgtcgcagaacaatgcctttgcacaaaataaacccgtggggtttggcaac
ttcgggacaagtactagcagcggcggcctctttggaaccaccaatacgacctccaatccc
tttgggggcacatccggctccctgtttggatctactagttttgcgactgttccaactggc
acgaccattaaatttaatcctccgactggcactgacacgatggtgaagtctggagtcagc
acaaacatcagcaccaagcatcagtgcatcactgccatgaaagagtacgagagcaaatcc
ctggaggaactccgtctggaagactatcaagcaaacaggaaaggtccctccaacccagtc
ggagccggggccactccaggcctgttcgggtcttctactgcaacctccagtgcagccacg
gggctctttggttcctccaccactaatgcgggcttttcctacggacagaacaagacgggc
tttggaaccagcgcatccggctttgggacgggcgcgggcagcctcttcggccagacgcag
cagacgaccggcctcttcaacaagcccttcggccaggccaccacggcacagaacgcgagc
tattcctttgggaacacacttgggcagcccagcacaagcacaatgggtttatttggagcc
acgcagccctctcagcctggaaccctttttggaacagcggctaatacaaacaccgcgacc
ggatttggaaccgggacaagtctctttggacaaaccaatacaggttttggtgttggtagc
tcgtccctatttagcaacaaaccagctggatttggaaccacgaccaccagtgcacccacg
tttggcacgacgacgagtggactttttgggtttggtgcgaacaacacggggaacagcctg
tttggaaacaagcctgccgctggcactctgggaactggcttgggaacaggatttggaaca
gtccttagtgcgggacagacctccctgtttgggaatacccagcctaaattgggaagcaca
ctggggacgggagcatttggagcctccggatttaatacctcagcagcctccctgggcttt
ggagcgccacagccagctgtggctttgacagacccaaatgcttccgcggctcagcaggcc
atcctgcagcagcacctcaacagcttgacgtacgcccccttcggggattcgcctctcttc
agaaaccccatgtctgacccaaagaagaaggaggagagactgaagccaaccaacccagcc
gcccagaaggccctgactacgcccacccactacaagctgacccctcgccccgccacccgg
gtgcggccgaaagccctgcagacgacgggctcctccaagtcccacctcttcgacggcctg
gatgacgacgagccggccctgtcgaacggggccttcatgcccaagaagaacattaagaag
ttggtgctgaagaacctcaacagcagcagcctcttctctcctgccagcggcgaagtcgat
gagctcgcctccccctccgagtatccagagagcggggaacggttcaacttcctctccagg
tccatcgacgagaaccacaggcaggagggagagctggaggaggaagagggccccccccgg
gaagcatcccggttcttcgccagcccccttggcaagccacttccccagacgccggacagc
accacgtacaaggcgcacggcggcgcggacgacaccatcctggccctgaacgtgcggcct
gcgctgcggaacgggctggaaggcagccgtgaggaggcctcctaccgcgaggagtccctg
caggatgagcacgaggaggaggtggagcacaggcattctgcgcatccagcaggaattgtt
ctggtacgagttggatactacactattccatccatggacgagctggccaaaatgacaaac
gacaaaggagagtgtattgtgacagacttcaccattggccgcaaaggctacggctccatc
tactttgaaggcgaagtcaacctgactagcctgaacctggacgagatcgtgcacatccgc
cggaaagaagtcatcgtctacccagacgacgagctgaagccacccgttggcgaaggctta
aatcggcgcgccgaagttaccttggatggcgtttggcccacagacaaaacctcgcgttgc
ttgataaagagcccggaacggctggcagagatgaactacgagggcaggctggaggcggtc
tctcggaagcagggggcccagttcaaggagtatcgccccgaaacgggatcgtgggtgttc
aaggtggctcacttctcaaagtatggcttgcaagactctgatgaggaagaggaggaacac
tcatcaaaagtagaggcaaagaaattaaaaactgcccaggtgccccctccaggccagctg
gtggctcagcaaatggctctaagtggaaaaccagcaccgtcttccaagagctccgatgtg
gaaccgctggggagggttgtggagctggacagcaacatggcagacgtcacgcaggagccg
gcgcaggactttgccgcggaagagaccctggcggaggagcaggagcccatggccgcctcc
acccacatcgcctctgcgctggacatcaacccccacacgctgcagatcatgaaggcctcc
ttgctggtggacgaggaggatttggacctgatcctcgatcgccgctttggcaagcaagcg
gcagcagcggatgcttctcaggagatctgctctccacggcttccaatctccgccttgaca
caaggacggaaaagccgtccgtcagctgcggggttgctgccatcaagactccccagtgga
tcgttgctccttccgagcgctgccctccagggcagctgcagtcccaggacttcctctcta
ggtgccgcagtgccggccccgccgtggtccgccatcccttcgctggcatccgtgctcaca
gtgccgagcccagcacctgacgtgcccctgaaaacggtgggcatccgcaggcaccttggc
ctggtgcccctggagaaatccgtcacctgcgggaaaggacggctgctgaaggacatggca
ctcttcatgggccggtcgttccgcgtcggctggggccccagctgggtccttgttcacagc
ggggagcagctgagcagcccacctgagccggaggagccccaggacgagtccatggagtac
ggcttcctgcccacgcccgttgccccaaagcagctctccgagtctccctttaaggtccac
gtggagaagctgagtttggaaaggagagctgcgggcaggcgcctgcaggccttcctccca
cccctcgagatcaagctcaagcacagcactgtccacctggatgagccctgcccactcctg
accccctgccccggtgtggcagctatccacgaatatgcgaggtgggcgactgagacctgt
ggcggcccggaagaagtggaagcggtcgtgaaggactggtgcttggtgtggaccttgggc
gaggcactctggggccacctgaaggagctggaggcccgcctggacgagcccagcgagtac
atcgtggctctgcagcgccggggggccttctcccgctggctgtcgcaggccgccgccctg
cgcatccaggacgaggtggcgctgagccagaaggacagtgccgcagaggccgtcttcagc
tgcctcactgggaagcagatcagcgaagcctgcaggctggcccaggagtctggggatcac
aggctggctctgctcctctcccagctggcagggagccaggaggtcagggagctgctggct
ttgcagcttacagactggcagcagctccaggcagacgccttcatccaggaggagaggctg
cgcatatttgccctcctcgcaggcaagccggtgtggcctttgtcggagaggaggactgtc
aacgtctgttcccagctggactggaagcgctgcattggcatccacctctggtatttgctt
ccttccacggcccccctttctgcggcgctcagcatgtacgaagctgccttccaggattcc
gtagagggcgataggtatgcctgcccgccgctgcctccgtatctagagggctcgggctgc
gtcctcgaggaaggcgacgcacagcagccgctgcgggacgtgtgctttcacctgctgaag
ctctacagtgaccggtgctacgacctgcatcagctgcttgaccccaggagcatcacggcc
gaccccctggaccaccggctcagctggcacctgtgggaagtgctgcgcgccctgaattac
acgcacctgtcggagcagcgccagggggtgctgagcgccagctacgccgcccagctcgag
agcgagggcttgtgggaatgggcggtcttcgtgctgctgcacacgcccgacgcgcacacg
cgagagcgagcggtgcgcgaactgctgagccgtcactgcacactgtccgagacgccggag
tcctgggaagaggaggccttcctcacggagaagctgtgtgtgccgcccgcgtggattcat
gaagccaaggccacgagggcccggatggagggggacaagcacaaggaggccctgtacctg
ttcaaggccgggcactggaaccagtgccacaggctggtgatccggcacctggcctcagat
tgcatcattaacgagaagtacgcctacctgaaggggttcttggaagacctggccgctcct
gagcgcagcaccctcatccaggactgggacacggccgggctggtcttcctggactacacc
caggtcatcgagatgctgcacaggatccagcagctggattgctctgggtatgagctggag
gagctgcacgccaaagtgatctcgctctgcagcaggatagagctggtccagtgccacagc
gccaaagacaggctggctcagtccgaaatggcgaagcgcaacgcagacatcctgcgcgcc
gtgctgaggctgcagcacccgccggagcccgcgcccgggggcttcctggacacgcagagg
gtgccgctgcgcctgctggccccccacatcggccggctccccatgcctgaggactacgcg
ctggaggagctccgtggcctcacacaatcctacctgcgtgaactgactgtggtggcgcag
tga
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integrated database retrieval system
