Varanus komodoensis (Komodo dragon): 123017307
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Entry
123017307 CDS
T07701
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
123017307 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vko03036
]
123017307 (ERCC6)
03400 DNA repair and recombination proteins [BR:
vko03400
]
123017307 (ERCC6)
Chromosome and associated proteins [BR:
vko03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
123017307 (ERCC6)
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
123017307 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
123017307
NCBI-ProteinID:
XP_044274516
Ensembl:
ENSVKKG00000014684
LinkDB
All DBs
Position
Unknown
AA seq
1468 aa
AA seq
DB search
MPSEKPQLEGSLQEQSHGTAGSSLGEAEGAAAAQGDDLPASETHVGPRQDALAFESSFPA
PAADAPFGAPRKGPLLLIDRQQIQSVQAEELRGLGVDVYDQDVLEQGVLRQVDHAVHEAN
KAVQVASAKTELRSVLDDARSCKASLKGIDAIIEQFTPQAASNKDIKRKLDSVKRQKYNK
EQQLKKIKAKQRHLQVILGEEVLDGPGEDASEEDGDPGPSSLGSMLMPAQETEWEKLIRT
GQMTPFGTQIPQKQERKPRQIMLNEASGFEKYLADQAKLSFERRRSSVQKGAKQKAPVQK
GQSKAPARPPKGKGSKRKALSKTDSRLQRRMRKLQSHVLQIRAKASVPRAKGTEGAEQQE
DGTEPESLPDEGLGSPEEEEGSFQDSDGDEYRVSPVPRGKKPSLMQTLHEEEIAGSDFLT
SSEEEEEEGIVGKRKIKRYRDDGDEDSYKQRLRRWHRQQLKEREDRRKAGEESDESDAEF
LEGFRVPGFLFKKLFKYQQTGVRWLWELHCQQVGGILGDEMGLGKTIQIIAFLAGLSYSK
IRTRGSNYRYRGLGPTVIVCPATVMHQWVREFHTWWPPFRVAVLHETGSYASKKVKLIRE
MVACSGIVITSYSYVRLLQENMCSYNWHYVILDEGHKIRNPNAAVTLACKQFCTPHRIIL
SGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYKCACI
LRDTINPYLLRRMKGDVKMSLSLPDKNEQVLFCRLTAEQHEVYKSFIDSKEVYQILNGDM
QVFSGLIALRKICNHPDIFTGGPKILKGVSDEELSEEERFGFWKRSGKMIVVESLLKIWH
RQGHRVLLFSQSRQMLHILEAFLQQRGYSYLRMDGATTVASRQPLIARYNEDKSIFVFLL
TTRVGGLGVNLTGANRVIIYDPDWNPTTDTQARERAWRIGQTREVTVYRLLTAGTIEEKI
YHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDNMQGTETSAIFAGTGSDVPQP
KPRSKRKAPGFSGAAGRRHPAERPSPAGAKLPGCPSAHPGAVPATAPAEPSGGIPGSTEA
SLPGLPEHDAPAEAESFARVEERPLGPAEGAPPGAPPEDERGPADAGLPHAAPRGESRVG
AGGQDSLAEKKSGPFEGQGGDVRADGNGRHAVGARRPEGRPRKPKRVRDAKFEGERIPHL
VKQRKYRKQDQEEEEEQKESKKTDDYVLEKLFKKSGIHSAMEHDAIMDASSPDYVLVEAE
ASRVAQDALGALRVSRRQYWGAASAAPAWTGAAGRPARGKSRFGQKRNPRLVTPSSPSPA
PGKKCKEDEGGGEENSKKNASAAHLEGKVEAGESSSSSMLSSSSLLARMRERNHLIMPQR
TGEEAPPGPGGAPPAATAHDELLVDIRNFLAFQAHVPGRASTQEILHEFESKLTVQQSCV
FRELLRNLCTFHRQSNGEGLWNLKPEFS
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgagaaacctcagctggaaggcagccttcaggaacagagccatggtactgcc
gggagcagtttgggtgaggcagaaggtgcggcggctgcgcagggagacgacctgcctgcc
agtgagactcacgtgggcccccgccaggatgcacttgccttcgagagcagctttcctgca
ccagcagccgatgctccttttggggcacccaggaagggacccctgctgcttattgaccgg
cagcagatccagtctgtgcaggcggaggagctccgaggcttgggtgtcgatgtttacgac
caggacgtgctggagcaaggagtccttcggcaggttgaccatgccgtgcacgaagcaaac
aaggcggtgcaggtcgccagcgcgaaaacagagctccggtctgtgttggatgacgcgagg
tcatgtaaagcatccttgaaaggaattgacgccattattgagcaattcactcctcaagct
gcctcgaacaaagatattaagagaaagttagattctgtgaagcggcaaaaatacaacaag
gagcagcagctgaaaaaaatcaaagcgaagcaaaggcaccttcaagtgattctaggcgaa
gaggtcctcgatggaccaggtgaggatgcttccgaagaagatggagaccccggcccctca
tccctcggcagcatgcttatgccagcccaggaaacggaatgggagaagctgatccgaact
ggccagatgaccccctttggaacacagataccccagaaacaagagaggaagccccgccag
ataatgttaaacgaagcctctggctttgaaaaatacttggcggatcaagcaaagctctcg
tttgaacggaggaggtcatctgttcagaagggggccaagcagaaagctcctgtacagaag
ggtcagtccaaagctccagcacgtcccccgaaaggcaagggaagcaagaggaaagctctg
tcgaaaacggacagccgcctgcagaggcgcatgagaaagctgcagagccacgtgcttcag
atccgggcaaaggccagcgtccccagggccaagggaacggagggagccgagcagcaggag
gacggcacagagccagagagcctgcccgatgaaggcctcggcagtcccgaggaggaagag
ggaagctttcaggacagtgatggggatgagtacagagtgagccctgtcccacgggggaag
aagccctcactaatgcagactttgcacgaagaggaaattgcgggatccgacttcctcacc
agctctgaggaggaggaggaggagggcattgttgggaagcggaaaatcaagagatacaga
gatgacggtgatgaggattcctataaacaaaggttaaggaggtggcacagacagcagctg
aaagagcgagaggaccggcggaaggctggcgaggagtctgatgaaagtgatgctgaattt
ctcgagggctttagagtcccaggttttctcttcaaaaagcttttcaagtaccagcagacg
ggagtgcggtggctgtgggagctgcactgccagcaggtggggggaatcctgggcgatgaa
atggggctgggcaagaccatccagatcatcgccttcctggcaggcctgagctacagcaag
atcaggactcgcggctccaattacaggtacagaggactcggtccgacggtgattgtgtgt
ccggccaccgtaatgcaccagtgggtgagagagttccatacttggtggccgccgttcagg
gttgcagtcctgcacgagacgggttcctacgccagcaagaaggtgaagctgattcgggag
atggtcgcctgcagcggcattgtgataacctcctactcgtacgttcgcttgctgcaagag
aacatgtgcagctataactggcattacgtgatcctggatgagggacacaaaatccggaat
ccgaacgctgcggttacactcgcttgtaaacagttctgcacgccgcatcggatcatcctg
tccgggtcgcccatgcagaacaacctgaaggaactgtggtccctcttcgattttgtattt
ccgggaaaactgggcacactgcccgtctttatggagcaattctctgttccgatcaccatg
ggagggtatgccaatgcctccccagtccaggtaaaaacggcatacaagtgcgcatgtatt
ttacgtgacaccatcaacccatatttgctgcggaggatgaagggtgatgtcaagatgagc
ctctcgctgcccgataaaaacgaacaggtcctgttctgccgactgacagctgagcagcac
gaagtttacaaaagctttatcgattccaaggaagtctatcagattctcaacggagacatg
caggttttctctggtctgatagccctgaggaagatctgcaaccacccggacatcttcacg
gggggccccaagatcttgaagggcgtgtctgatgaggaactaagtgaagaggagcgcttc
gggttctggaaacgttctgggaagatgatcgttgtcgagtctctgctgaaaatttggcac
aggcaggggcaccgggttctccttttttctcagtctaggcagatgctgcatatcctggaa
gcgtttctgcagcagaggggctactcctacctcagaatggacggcgccacaaccgtcgcc
tcgaggcagccgctgatcgccaggtacaacgaggacaaatccatatttgtgtttctgctt
acaacccgagtcggcgggcttggggttaacctgaccggagccaaccgagtgatcatctac
gaccccgactggaatcccactaccgacacccaggctcgagagcgtgcgtggagaatcggc
cagacgagagaggtgacggtgtaccggctcctcaccgcgggcaccattgaagaaaagatc
taccacagacaaatcttcaaacaatttctaacaaacagagtgctgaaagatccaaagcag
aggcgcttcttcaaatccaacgatctgtatgaactcttcactttgagcagcccggacaac
atgcaggggaccgaaaccagcgccatcttcgcaggcaccggctctgatgttcctcagccg
aagcctcggtcgaagcggaaggctccaggcttctctggtgctgctggaagacgccacccg
gcagagcgtccctcgcccgccggcgccaagctgccaggctgcccctcagcgcacccaggc
gctgtgccagcaactgcccccgcagaacccagtggaggcatcccgggaagcacagaagca
tccttgcctggtctcccagaacacgacgctccggctgaggcagagtccttcgctagagtg
gaggagaggccgctggggccagcagagggagcgccgcctggagcgccgcccgaggacgag
cggggccctgcggatgcgggtttgccgcacgccgcacccagaggggagtctcgtgtaggt
gctggcgggcaggatagcctggcggagaagaagagtggccccttcgaggggcaggggggc
gatgtgcgagcagacggcaacggcaggcacgctgtgggagccaggcgccccgagggcagg
ccgaggaagcccaagcgtgtccgagatgccaagttcgagggcgagcgcattcctcacctg
gtgaagcagagaaagtaccggaagcaagaccaggaggaggaggaggaacagaaagagtca
aagaaaactgatgactatgttttggagaagcttttcaaaaaatcaggaatacacagcgcg
atggaacacgacgcaatcatggatgcctccagccccgattacgtgctcgtggaagcggaa
gcgagtcgcgtggctcaggacgccctcggggccctcagggtctctcggcggcagtactgg
ggagccgcttcggctgcccccgcctggacgggcgccgctggccggcctgcgagaggaaaa
agcaggttcggccagaagaggaacccgcgcttggtgacgccctcttctccgtctcccgcc
ccagggaagaaatgcaaggaggacgagggtgggggagaagagaacagcaagaaaaatgct
tccgctgctcaccttgaggggaaagtggaagccggcgagtcgtcgtcctccagcatgctg
agctcctcgtccttgctggctaggatgcgggagagaaatcacctcattatgccccagaga
acgggggaggaagcccccccggggccagggggcgctcctccagcggccacggcgcatgac
gagctgctggtggatatccgaaactttctggccttccaggcccatgtgcccggtcgggcc
agcacgcaggaaatcctgcacgagttcgagtcgaagctgacagtgcaacagtcctgtgtc
ttccgggagctcctgagaaacctctgcactttccacaggcagtcaaatggggagggactc
tggaacctgaagccggagttctcctga
DBGET
integrated database retrieval system
