Varanus komodoensis (Komodo dragon): 123017324
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Entry
123017324 CDS
T07701
Symbol
XNDC1N
Name
(RefSeq) putative short transient receptor potential channel 2-like protein
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vko04040
]
123017324 (XNDC1N)
Ion channels [BR:
vko04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123017324 (XNDC1N)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_3
YVC1_C
Motif
Other DBs
NCBI-GeneID:
123017324
NCBI-ProteinID:
XP_044274536
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MAPVKVKYIVSFTSEDPKHPVENLLREEGPRPWLCCPRDRSRPLKAELQLERACRISYID
VGNCGSAFLQIDVGRSSWPRDQPYRTLLPATALMAPADAKLDRNRSGVRMFKEGDFLASA
RAEKWDRVRLTCSQPFNRHTQFGLAFICVRTPLDPEDSTAEPAAASQVPPELKSSPWLSN
AAICRTYFPETAPSSEEEAALRTHLQQLDPASSPEPRSPACMSRPARMVLKAASARKRVF
PLAVSAVAPGPAQSASRGPPTARSGQELPVRRERLKASRRRGTSRGLERSPAVPSARSRN
GSRRERRTEGQRGRLRNVQGDSEEEEQDGNRPRGSDVGFGTCPICAGRFPTSLLPAHASG
CGEADERAGAASPSSSWDEPTEAWVPCPICQLSYAAVHVESHASTCGEQDEALDGGRDGG
GPLASRPLAGPAALLPAGTWRGKTRHSRLGTEAAEPPGRAPPPRGPAGKAPRAPVAGSPA
GTMADYEGITRLPASPILPSSALTSEGFGFGSEEQHPRSAMRDSRATERATNRQPPLSFC
PSPQQANWKEIVNKKLKFPEGLLGAIQDGHLGKVQQLLQVSDGILRQLDEAEDRAWREAL
NMAIRTGGEEMSKTLLRFVKFDFRQVHEALLVAVDTNQPSVVKLLLDRLDQEKGLKMDIK
SFSLAFFDNSIDNSRFAPGVTPLTLACEKDLYEIVDMLMKKGHAISRPHKVSCACLECSN
GRKFDLLKFSLSRINTYKGIASRAHLSIASEDAMLTAFKLSRELKRLSKKEPEFKPDYLA
LEQLCQEFAFELLGMCRNQSEVTAVLNDVGDDAMDEDEEDVDDQAFEEGIPNLARLRLAV
NYNQKQFVAHPICQQVLSSIWCGSLQSWRGSTSLWKVFISCAIFLAMPFLCLIYWFAPKS
KVGKILKIPVIKFLLHSASYLWFLVFLLVESLVLEHHQEAFKGRNQTMWETSLHMIWVAG
FFWFECKEVWIEGLRSYLLDWWNFLDIVILSMYLASFVLRVLIFIKGTSCLESGSSSLEC
HYYTQAERDEWRTEDPQFMAEVLFAVTSMLSFTRLAYILPAHETLGTLQISIGKMIDDMI
RFMFIMMIILTAFLCGMNNIYVYYQDSERLGSFNETFQFLFWTMLGMEEHNVVDMPKFFL
AELMGRVLYGVFTIVMVVVLLNMLIAMITNSFQKIENDADVEWKFARSKLYLSFFREGLT
LPVPFNIIPTPKSIFYAIRGLLRFMCCYKPKRQQKYPPLPTISNPSVEEGGLRADSRVAY
RRQVLKALVQRYIDTARREFEESRRKGE
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggcccctgtgaaggtcaaatacatcgtgtctttcacatctgaggatcccaagcaccca
gtggagaacctgcttcgcgaagaaggccctcggccctggctctgttgcccacgcgatcgg
agccggccgctgaaagcggagctgcagctggagcgagcgtgtcgcatcagctacatcgac
gtggggaactgcggctctgccttccttcagatagacgtggggcggtcctcctggccgcgg
gaccagccttaccgcacgctgctgcccgccaccgccttgatggcgcctgccgacgccaag
ctggacaggaaccgttccggggtccggatgtttaaagaaggggacttcctggcctcggct
cgggccgagaagtgggaccgcgtccggctcacctgcagccagcccttcaacaggcacacg
cagtttggcctcgccttcatctgcgtccgcactccgctggacccagaggacagcacagcg
gagccggctgccgctagccaggttcctcccgagctcaagagcagcccatggctctctaat
gcggccatctgtcggacgtacttcccggaaacggcaccgagcagtgaggaggaagcagcg
ctgagaacccacctgcagcagctggatcccgcttccagccctgagccccggagtcctgcc
tgcatgagccgcccggccaggatggtgctgaaggcggcgagtgcccgcaagagggtcttc
cccctggccgtgagcgccgtcgcgccgggaccggcccagagtgcctctcggggtcccccc
acagcgcggtccggtcaggaattgcccgtgagaagagagcgactgaaagcaagtagaaga
aggggaaccagccgcggcttggagaggtccccggcagtcccttctgccaggtctcgaaac
gggtcccgaagggagaggagaactgaaggccagaggggaaggctgaggaacgtgcagggt
gacagcgaggaggaggagcaggacgggaacaggccacgggggtcagacgtgggctttggc
acgtgccccatctgcgccggccgctttcccaccagcctcctgcccgctcatgcctcgggc
tgcggagaagcggacgagagagccggcgccgcctcgccttcctcctcgtgggacgagccc
acggaggcctgggttccctgccccatctgccagctttcgtacgctgcggtgcacgtggag
agtcacgcgagcacttgcggggagcaggacgaggccttggacggcgggcgggacggagga
gggcctctcgcaagccgccccctggcgggaccggctgctcttctgcctgctggcacctgg
cggggaaaaacaaggcattcccggctcggcaccgaagcagcagagccgcccggccgggcc
ccgccgcctcggggtccagcggggaaggcgccccgagcaccggtcgccggctcccccgcg
ggcacgatggcggactacgagggcatcacgagacttcctgcctcccccatcttgccctcc
tcggcactgacctccgaagggttcgggttcgggtctgaggagcagcaccctagaagtgct
atgagagactccagggccacagagcgtgcaacaaaccgacaaccgccgttgtccttctgc
ccctcccctcagcaagccaactggaaagaaatcgttaacaagaagctgaagttcccggag
gggctgctgggcgccatccaggacggccacctggggaaggtgcagcagctgctgcaggtg
agcgacgggatcctgcggcagctggacgaggccgaggaccgggcgtggcgagaggcgctg
aacatggccatccgcacgggcggcgaggagatgagcaagacgctgctgcgcttcgtcaag
ttcgacttccggcaggtgcacgaggccctgctggtcgccgtggacacgaaccagcccagc
gtcgtcaagctgctgctggaccggctggaccaggagaagggcctcaagatggacatcaag
tccttctcgctggccttcttcgacaactccatcgacaactcgcgcttcgcccccggcgtg
acgcccctcaccctggcgtgcgagaaggacctctacgagatcgtggacatgctgatgaag
aaggggcacgccatctcgcggccccacaaggtctcgtgcgcctgcctggagtgctccaac
ggccgcaagttcgacctgctcaagttctcgctctctcgcatcaacacgtacaaaggcatc
gccagccgggcccacctctccatcgccagcgaggatgccatgctgaccgccttcaagctc
agccgcgagctcaagcgcctctccaagaaggagcccgaatttaagccggactacctggcc
ctggagcagctgtgccaggagttcgccttcgagctgctgggcatgtgccgcaaccagagc
gaggtgacggccgtgctgaacgacgtgggcgacgacgcgatggacgaggacgaggaggac
gtggacgaccaggccttcgaggagggcatccccaacctggcgcggctccgcctggccgtc
aactacaaccagaagcagttcgtggcgcaccccatctgccagcaggtgctctcgtccatc
tggtgcgggagcctgcagagctggcggggcagcaccagcctctggaaggtcttcatctcc
tgcgccatcttcctggccatgcccttcctctgcctgatctactggtttgcccccaagtcc
aaggtgggcaaaatactgaagatcccggtgatcaagttcctgctgcactcggcctcgtac
ctctggttcttggtgttcctgctggtggagtcgctggtcctggagcaccaccaggaggcc
ttcaaggggcgcaaccagaccatgtgggagacctcgctccacatgatctgggtggcaggg
ttcttctggttcgagtgcaaggaggtctggatcgagggcctgcgcagctacctgctggac
tggtggaacttcctggacatcgtgatcctcagcatgtacctggcctccttcgtgctgcgc
gtgctcatcttcatcaagggcaccagctgcttggagagcggctcctcctcgctcgagtgc
cactactacacccaggccgagcgggacgagtggcgcacggaggacccccagttcatggcc
gaggtgctcttcgcggtgaccagcatgctgagcttcacccgcctggcctacatcttgccg
gcccacgagactctgggcacgctgcagatctccatcggcaagatgatcgacgacatgatc
cggttcatgttcatcatgatgatcatcctgacggccttcctgtgtgggatgaacaacatc
tatgtgtactaccaggactccgagcggctgggcagcttcaacgagacgttccagttcctc
ttctggaccatgctcgggatggaggagcacaatgtggtggacatgcccaagttcttcctg
gccgagctgatgggccgcgtgctctacggggtcttcaccatcgtcatggtggtcgtcctg
ctgaacatgctcatcgccatgatcaccaactccttccagaaaatagagaacgatgccgac
gtggagtggaaatttgcacgctcgaagctctacctgtctttcttcagggaaggcctgaca
ctcccagtccccttcaacataatcccaactccaaagtccatcttctatgccatcaggggc
ctcctccgcttcatgtgctgctacaagcccaagcggcagcagaagtatcccccgctcccc
accatctccaacccgtcggtggaggagggcggcctgcgcgccgacagccgcgtcgcctac
cgccgccaggtgctcaaggcgctggtgcagcgctacatcgacacggcccggcgcgagttc
gaggagagccggcgcaaaggtgag
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