Varanus komodoensis (Komodo dragon): 123017505
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Entry
123017505 CDS
T07701
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03020
RNA polymerase
vko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123017505 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
123017505 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vko03021
]
123017505 (POLR2B)
03400 DNA repair and recombination proteins [BR:
vko03400
]
123017505 (POLR2B)
Enzymes [BR:
vko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123017505 (POLR2B)
Transcription machinery [BR:
vko03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123017505 (POLR2B)
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123017505 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
123017505
NCBI-ProteinID:
XP_044274843
Ensembl:
ENSVKKG00000004215
UniProt:
A0A8D2IWF5
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MFDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEHEYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGIQEEVFEKPSRETCQGMR
HAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSET
GIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGI
TPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYH
LRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRD
GGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGCR
NKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgccgatgaagatatgcagtatgatgaggatgatgatgaaatcactccggac
ttgtggcaggaagcatgctggattgtcatcagctcctattttgatgaaaaaggcctggta
cgacagcagctggattcttttgatgagttcattcagatgtctgtgcagagaattgtagaa
gatgccccaccaattgatctacaagcagaagctcaacatgctacaggagaagtagaagaa
ccaccacgctatcttttgaaatttgaacaaatttatctctccaagcctacacactgggag
agagatggtgccccttcacctatgatgccaaatgaagccagactgagaaatcttacgtat
tctgctccattgtatgtggacataactaagacagttattaaggaaggagaggaccagttg
caaacacagcatcaaaaaacattcataggaaaaatacctatcatgctgcgatccacatat
tgcctgctaaatggcttaactgaccgtgatctttgtgaactgaatgaatgcccccttgat
cctggtggctatttcattattaatggatcagaaaaggttctgattgcccaagagaagatg
gctacgaacactgtatatgtgtttgcgaagaaagattctaaatatgcatatacaggagag
tgccgttcatgtcttgagaattcttctcggccaacaagtactatatgggttagcatgctg
gccagaggtgggcagggtgcaaagaagagtgccataggtcagcgcattgtggcaactttg
ccatacatcaaacaagaagtgcccatcattatagttttccgtgcattggggtttgtctct
gacagagacatactggagcacataatttatgactttgaggatcctgaaatgatggaaatg
gttaaaccttctttggatgaagcatttgtcattcaggaacagaatgttgcactgaatttc
attggttcaagaggtgcaaagcctggagtcactaaagagaagagaatcaagtatgcaaaa
gaagttttgcagaaagagatgcttccacatgttggtgtcagtgacttctgtgaaacaaaa
aaggcttattttctcgggtacatggttcataggttactgctggcagccttggggagaaga
gagctggatgacagggatcattatggcaacaaacgtttggatcttgcagggcccttactt
gctttcctgttcagaggaatgtttaagaacttgctgaaagaagttagaatatatgcacag
aaatttattgacagaggaaaagattttaacttggagctagcaatcaaaactaggataata
tcagacggtttgaaatactcattagccacaggaaactggggagaccagaagaaagctcat
caggctagagctggagtatcacaagtattgaaccgcctcacttttgcatctacactttct
cacctgcgtcgcttaaattcccctattggtagagatggtaaactggcaaaacccaggcag
ctgcacaacaccttatggggaatgatctgtcctgctgaaactccagagggtcatgctgtg
ggtcttgtgaagaatctagcgctaatggcctacatctctgtggggtctcagccatctcca
attctggaatttttagaagaatggagtatggaaaacctggaagagatctctccagcagcc
attgctgatgccacaaagatatttgtgaatggttgctgggttggaatacacaaagaccct
gaacagctcatgaacacattaaggaaactgcgacgtcagatggacatcattgtgtcagag
gtatccatgatcagggatatcagggagcgagaaatccgcatttatactgatgctggcagg
atttgtcgtccactcctaattgtggagaaacaaaagttgctgctgaagaagaggcatatt
gaccaactgaaagagcatgaatacaacaactatagctggcaggatctggtggccagcggt
gtggtggaatacattgataccctggaagaggagactgttatgctggccatgactccagat
gacttgcaggagaagggtgttgcatactgttcaacttacacacactgcgagattcaccca
tctatgatcctaggagtctgtgcatctattatcccatttccagatcacaaccagtctcct
aggaatacatatcagtctgctatgggcaagcaggcaatgggagtttatatcaccaacttt
cacgttcgtatggacacacttgcccatgtgctatattatccccagaaaccccttgtgact
acacgctctatggaatacctgcgattcagagagttgccagcaggcatcaattctattgtg
gccatagcttcatataccggatataaccaagaggattctgtcattatgaaccgttctgct
gttgacagaggctttttcagatctgtgttttaccgttcttacaaagagcaggagtccaag
aaaggaatccaggaagaagtgttcgagaaacctagtcgtgagacatgtcaagggatgcga
catgccatctatgacaagctggacgatgacggcttgattgcgcctggtgtgcgtgtctca
ggggacgatgtcataatcggcaagacagtaactttgcctgaaaatgaagatgaactggag
agcaccaaccgtcgttacaccaagagagattgtagcaccttcttgcggactagtgaaact
ggaattgtagatcaggtcatggttactttgaaccaggaaggatacaagttttgcaaaatt
agggtacggtctgtaagaattccacaaattggagataaatttgccagcaggcatggtcag
aaaggtacctgtggtatccaatacagacaagaggatatgcctttcacttgtgaaggcatt
acccctgatataatcatcaacccccatgccatcccatcacggatgaccattggtcacttg
atcgaatgtctacaggggaaggtatctgcaaataagggagagataggtgatgccacacct
ttcaatgatgcagtcaacgtgcagaagatttcaaacttgctgtctgattatggctaccac
ctgagaggaaatgaggttttgtacaatggcttcactggtcgcaaaatcacatcacagatc
tttattggccctacatactaccagcggttaaagcatatggtagatgataaaattcattcc
cgtgcaagaggaccaattcagatccttaacaggcaacccatggaaggtcgatctcgtgat
ggtggccttcgttttggagaaatggaacgagactgtcagatcgctcatggagcagcacag
ttcttaagggaaagattgtttgaagcatcagatccataccaggttcatgtctgcaacctg
tgtggcttaatggcaatagcaaataccaggacacacacctatgagtgcaggggctgccgt
aataagacacagatttctctggtgagaatgccatacgcctgcaaactcctcttccaagaa
ctgatgtcaatgagtattgcacctcgaatgatgagtgtctag
DBGET
integrated database retrieval system
