Varanus komodoensis (Komodo dragon): 123017838
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Entry
123017838 CDS
T07701
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03015
mRNA surveillance pathway
vko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123017838 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
123017838 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123017838 (PABPC4)
03041 Spliceosome [BR:
vko03041
]
123017838 (PABPC4)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123017838 (PABPC4)
mRNA cycle factors
Stress granule specific factors
123017838 (PABPC4)
Spliceosome [BR:
vko03041
]
Complex C
Other components
Complex C specific factors
123017838 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_10
RRM_occluded
RBD_RDR6
RRM_3
DUF6262
POP1_C
Motif
Other DBs
NCBI-GeneID:
123017838
NCBI-ProteinID:
XP_044275376
Ensembl:
ENSVKKG00000008283
UniProt:
A0A8D2J8N2
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MNTAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDESGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEK
HEEANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANAIINQFQPAAGGYFMPAVPQAQSRP
TYYAPNQMTQMRPSPRWQQGGRPQGFQGMPNTMRQSGPRPALRHLAPASNAQAARGLPGA
TQRVGVAATAPNLAPRPPVATQAPRAVPPYKYASSVRSPHPVQPLQAPQPAVHVQGQEPL
TASMLAAAPPQEQKQMLGERLFPLIQAMHLNLAGKITGMLLEIDNSELLHMLESPESLRS
KVEEAVAVLQAHQAKKEAAQKVGMVAATS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagctgccagtagctacccaatggcttctctgtacgtgggtgacttgcaccct
gacgtcacggaggccatgctgtacgagaagttcagccctgcgggcccagtcctttccatc
cgcgtctgcagagatatgatcacccgacgctccttgggatacgcatatgtcaactttcaa
cagccagcggatgctgagcgagccttggacaccatgaactttgacgtgatcaaaggcaag
cccatccgcatcatgtggtctcagcgggacccttccctgaggaaatctggggtaggaaac
gtcttcattaagaacctggacaaatccatagacaacaaggcactttatgacacattctca
gcttttgggaacatcctttcttgcaaagtggtgtgtgacgagagtggctcgaagggctat
gcctttgtgcactttgagacacaggatgctgcagatcgggccattgagaagatgaatggc
atgctgctgaacgaccgcaaagtatttgtgggcagatttaaatcccgtaaagaacgtgag
gcagaattgggagcgaaagcaaaggagttcaccaatgtctacattaaaaattttggagat
gacatggatgatgagaggctgaaggaactcttcagcaaatatggaaagaccctcagtgtc
aaagtcatgacagaccctactgggaagtccaaaggctttggcttcgtgagctttgaaaag
catgaagaagccaacaaggcagtggaagaaatgaatggaaaagatatcaatgggaaaatg
gtgtttgtgggtcgggctcagaagaaagtggaacgccaggcagagctgaaacgcaaattt
gagcagttaaaacaagagagaattagccggtatcagggagtcaatttgtacattaagaac
cttgatgataccattgatgatgagaaactgagaaaggagttctctccttttgggtccatc
acaagtgccaaggtaatgttggaggatgggcgcagcaaaggctttggctttgtctgcttt
tcctctccggaagaagccacaaaagctgtaacagaaatgaacgggcgcattgtgggctcc
aagccgttgtacgtggccctggcacagcggaaggaagagcggaaggcccacctcaccaac
cagtacatgcagcgcattgctgggatgagagccttgcctgccaacgccatcatcaatcag
ttccagcccgctgccggtggatatttcatgcctgcagtaccccaggctcagagtaggccc
acttattatgcgccgaatcagatgactcagatgagaccgagcccacgctggcagcaaggg
gggaggccacaaggtttccaggggatgccaaacaccatgcggcagtctggaccaaggcct
gcactacgtcacctggctccagcgagtaatgcgcaggctgcacgtggcctgcctggagct
actcagagagtgggggttgctgccacagctccaaacttagcacctcgtccacctgtagct
actcaagctcccagggctgttccaccctacaaatatgcctcaagtgtccgcagccctcac
ccagtacagcctttgcaggcgcctcagcctgccgtccatgtccagggacaggagcctttg
actgcatccatgctggctgctgctcccccccaggagcaaaaacagatgctgggagagcgt
ttgttccccctgatccaagctatgcatctcaaccttgcaggaaagattacaggaatgctg
ctagagattgataactcagagttactgcacatgctggagtctccagaatccctccgctca
aaggtggaagaggcagtggccgtactgcaggctcaccaagccaagaaagaagctgcccag
aaagtgggcatggttgctgctacctcctaa
DBGET
integrated database retrieval system
