Varanus komodoensis (Komodo dragon): 123017923
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Entry
123017923 CDS
T07701
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03018
RNA degradation
vko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123017923 (LSM2)
09123 Folding, sorting and degradation
03018 RNA degradation
123017923 (LSM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123017923 (LSM2)
03041 Spliceosome [BR:
vko03041
]
123017923 (LSM2)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123017923 (LSM2)
mRNA degradation factors
5'-3' decay
Lsm complex
123017923 (LSM2)
Spliceosome [BR:
vko03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123017923 (LSM2)
Complex C
U2 snRNP components
123017923 (LSM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
123017923
NCBI-ProteinID:
XP_044275529
Ensembl:
ENSVKKG00000006056
UniProt:
A0A8D2J986
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctactcatttttcaagtccctggtagggaaggatgtggtggtcgagttgaag
aatgacctgagtatatgtgggaccctacactccgtggaccagtatttgaatatcaagctc
acagacatcagtgtgacagatccggagaaataccctcacatgttgtctgtcaagaactgc
ttcatccgtggctctgtcgtccgctatgtccagctgccggccgatgaggtcgatacgcag
ctgctgcaggatgcggcgcgcaaggaagcccttcagcagaagcagtga
DBGET
integrated database retrieval system
