Varanus komodoensis (Komodo dragon): 123017993 Help Entry 123017993         CDS       T07701                                  Symbol SKIV2L Name (RefSeq) helicase SKI2W isoform X1   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism vko  Varanus komodoensis (Komodo dragon) Pathway vko03018   RNA degradation Brite KEGG Orthology (KO) [BR:vko00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     123017993 (SKIV2L)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vko03019]     123017993 (SKIV2L) Enzymes [BR:vko01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      123017993 (SKIV2L) Messenger RNA biogenesis [BR:vko03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      123017993 (SKIV2L)   mRNA degradation factors    3'-5' decay     Ski complex      123017993 (SKIV2L) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ski2_N DEAD MTR4_beta-barrel DSHCT MTR4-like_stalk Helicase_C DEXQc_Suv3 ResIII DUF3516 Motif Other DBs NCBI-GeneID:  123017993 NCBI-ProteinID:  XP_044275641 Ensembl:  ENSVKKG00000008766 LinkDB All DBs Position Unknown AA seq 1308 aa AA seqDB search MELERMALPPRGPLELPLSVLEVGCAGRFELITQEEGPDRDGFPLTTLPHGLPPYAEDLV SELEQNFLNSPEWLPIHHFERSHRFWPREKDIQSLFKVDATPVHSTLQAERNPTTGELLG FREALVDNMGLSAKNSLSFQRAPGPPAEALRGSATNYPFWPGGMDEPSLEQITAQEDLEE DIDFEKDLLTVPPGWKKGVEFTKQELKASPGLLNLTNLLGALDTFELEASSDEEVKEKAE EMEKRKKKGKEKGVKEEQMPPAEPVPLQRANSLEELVLKEVTPTPKAATEAAPTAAPTPA QAADAPKEQWAVPVDISSPVDDFYKRIPDPAFKWPFEPDVFQKQAILHLEKHDSVFVAAH TSAGKTVVAEYAIALSQKHMTRTIYTSPIKALSNQKFRDFKNTFGDVGLLTGDVQLHPDA SCLIMTTEILRSMLYNGSDVLRDLEWVIFDEVHYINDSERGVVWEEVLIMLPDHVNIILL SATVPNTLEFADWIGRIKRKKIYVISTLKRPVPLEHYLYTGNSQKTQNELFLLVDARGTF LTKGYYDAVDAKKERASRHSQTFGAKQPMHPGGGPGQDKNIWLSLIDMLRKKDQLPVVAF TFSRNRCDDNATMLTTVDLTTTTEKSEIHVFFQKCISRLKGTDRQLPQVLHMVDLLKRGI GVHHSGILPILKEVVEMLFSKGLVKILFATETFAMGVNMPARTVVFDSIRKHDGANFRDL VPAEYIQMAGRAGRRGLDTTGMVIILCKNQVPEMADLHRMMLGKPTQLQSQFRLTYTMIL NLLRVEALRVEDMMKRSFSEFHTRKDSKVYEHRITQLSCILASMEAVDTSGQLGDLQEYY QVVRELQETRELIQRRVTESVNGLKTLSVGRVIVVKNQEHRNALGVILQVSSDTANRAFS TLVMCEKGAVERDSSTGKETNLPSRPDVPLPEDFLRSRLFLPEGPCGHTIKKLGPSDVSG ITTKTLRVNAERILEDFKKRQMPRFRNDPPGPSAATATQELLRLAEGSPEGLPLLDPVND LQLKNLEVVEGVVRARQLEEALPQFQCVHSPRFHTEFGRFQERQRVLEELEQLRFLLSDQ SLLLLPEYHQRVEVLRSLGYINESGAVELKGSVARQISNHELLLTQLLLDNALTDLRPEE IVALLSCTVCQVRTQVEPQLPSVLQKGIEHIRSVAEEIALLQRKCGLRESVEDFVEQYKF GLVEVVYEWARGMVRTAAPPQSPTSPAHRSAWPFSGPKRPRKGCCGWAPSERDGDEMVPE LGFLLGQVWGAEADPQNTPPQPNPRAFPGLWHEGRLLASLSSATRVSF NT seq 3927 nt NT seq  +upstreamnt  +downstreamnt atggagctggagaggatggccctgccccccagggggcctctggagctgcccctctctgtt ttggaagttgggtgcgctggccgttttgagctcatcactcaagaggagggccccgacaga gatggatttccactgactacgcttccccatgggttgcccccttatgcggaggacctggtc tccgagttggagcagaactttctcaacagccctgagtggcttcccatccaccattttgaa aggtctcacagattttggccccgcgagaaggacatccagtcgctcttcaaggtagatgcc acacctgtgcactccacacttcaggctgagcgcaaccccaccacaggagagttgctgggt ttccgagaggcacttgtggacaacatgggcttatcagccaagaattccctttccttccag agagcgcctggtcctccggctgaggctctgcggggcagtgccaccaattatcctttctgg ccaggtgggatggatgaacccagcctggagcaaatcacggctcaagaagacctggaagag gacattgattttgagaaagatttgctgactgtgccgcctggatggaagaagggagtggag ttcaccaagcaagagctcaaggcctctccagggctgctgaatttgactaatttgttgggg gcattggatacctttgaattggaagcctccagcgatgaagaagtcaaggagaaggctgag gagatggagaagaggaagaagaaagggaaggaaaagggggtaaaggaagaacaaatgccc cctgcagaaccagtgccgttgcagagggcaaacagcctggaagaactggtgcttaaggag gtcacccccacccccaaggcagcaacagaggctgctcccaccgctgcccccacccctgcg caagctgctgacgcccccaaggagcaatgggccgttccagtagacatcagttcccctgtg gatgacttctacaagcggatccctgacccggctttcaagtggccttttgagccagacgtt ttccagaaacaggcaattcttcacctggagaagcatgattccgtatttgtcgctgcccac acatctgctggaaagaccgtagtggcggaatatgccatcgctctgtcccagaagcacatg acgcgcaccatatacacttccccgatcaaggctctttccaaccagaaatttcgggatttc aagaacacctttggagatgtgggcctgctgacgggggacgtgcagctgcatccagatgcc tcttgcctcatcatgaccacagagattcttcggtctatgctctataatggctcggacgtt ctcagagacctggaatgggtgatcttcgatgaggtgcactacattaacgactccgagcgt ggtgtggtctgggaagaggtcctcatcatgctgccggaccatgtgaacatcatcttgctg agtgccacagttcccaacaccctggagttcgccgactggatcgggaggatcaagaggaag aaaatctacgtgatcagcaccctgaagcgccctgtcccgctggagcattacctgtatacc ggcaatagccagaagacccagaacgagctcttcctcttggttgatgcccgggggacgttt cttaccaaagggtattatgatgctgtggacgccaagaaggagcgggctagcagacactcc cagacctttggtgccaagcagcccatgcacccgggaggtgggcccggacaggacaagaac atctggttgtcgctcatcgacatgctgcgcaagaaggaccagctgcccgtggtggccttc acgttctcccgcaatcgctgcgatgacaacgctaccatgctcaccactgtcgacctcacc acgaccacggagaagagcgagatccacgtcttcttccagaagtgcatctcccgcctgaag ggcacagaccgccagctgccccaggttcttcacatggtggacctgctgaagcgcggcatt ggcgtccaccacagcggcatcctgcccatcctgaaggaggtggtggagatgctgttcagc aagggcctggtcaagatcctctttgcgaccgagacgttcgccatgggggtgaacatgcca gcaagaaccgtggtcttcgattcgatccgtaaacatgacggggctaacttccgggatttg gtgccagcggagtacatccagatggcgggccgggctgggcgccgaggtctggacaccacc gggatggtgattatcttgtgcaaaaaccaagtgccggagatggctgatctccaccggatg atgttgggtaaaccaactcagctgcagtctcagttccgcctgacgtacaccatgatcctc aacctgctgagagtggaagcgctgcgcgtggaggacatgatgaagaggagcttctccgag ttccacacccggaaagacagcaaggtctatgagcacaggatcacccagctcagttgcatc ctggccagcatggaagcagtggatacatccgggcagcttggcgacttgcaggagtattac caggtggttcgagagctgcaggagacccgggaactcatacagaggcgagtcaccgagtca gtgaatgggctgaagaccctttctgtggggcgagtgattgtcgtgaaaaaccaagagcac aggaatgccctgggtgtgatcttgcaggtttcctctgacacggccaaccgagccttcagc accctggtgatgtgcgagaagggtgccgtggagcgggattccagcacaggcaaggagacc aacctcccctcccgtccggacgtgcctctcccggaagactttctgcgcagcaggctcttc cttccagagggcccctgcggacacaccatcaagaagctgggcccgtccgatgtttcaggc atcaccaccaagaccctgcgtgtcaatgctgagcgcatcctggaggacttcaagaagcga cagatgcccaggttcagaaatgatcctcctgggccatctgcagccacggcaacccaggag ctgctgcgtctggctgagggctcccccgagggccttcctctcctggaccccgtgaacgac ctccagctgaagaacctggaagttgtggagggagtggtgagggcgcgtcagctggaggag gcactgccacagttccagtgcgtacacagccctcgcttccacacagagttcgggcgcttc caagaacgccagcgggttctggaggagctggagcagctccgctttctgctgtcagaccag tccctcctgctgcttcctgagtatcaccagcgcgttgaggtcctgcgttccctgggctac atcaacgagagcggggccgtggaactcaagggcagcgtggcccgccagatcagcaaccac gagctgctcctgacccagctgctgctggacaacgccctgacggacctgcggccggaggag attgtggcgctgctgagctgcacggtctgccaggtccgcacccaggtggagcctcagctg ccctccgtccttcagaagggcattgagcacatccggtccgtggccgaggagatcgccctg ctgcagcgcaagtgtggcctgcgggagtccgtggaggactttgtggaacagtacaagttc gggctggtggaagtggtttacgaatgggcccggggcatggtaagaactgccgctccccca cagtctccgacttcccccgctcacagatctgcctggcccttctccggaccgaagcgtccc cgcaaaggctgctgtggctgggctccgagtgaaagggatggggacgaaatggtccccgag cttggcttcctgctggggcaggtgtggggagcagaggcagacccacagaacacgccgcca caaccaaacccaagagccttccctggtctatggcacgaaggtcgcctcctagcttctctc tccagtgcaacacgtgtctcattctga

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