Varanus komodoensis (Komodo dragon): 123018393
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Entry
123018393 CDS
T07701
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123018393 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vko04121
]
123018393 (HERC4)
Enzymes [BR:
vko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123018393 (HERC4)
Ubiquitin system [BR:
vko04121
]
Ubiquitin ligases (E3)
HECT type E3
123018393 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
123018393
NCBI-ProteinID:
XP_044276363
Ensembl:
ENSVKKG00000016245
UniProt:
A0A8D2LPS6
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKRPEQVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLAVDGQLGLPG
TEEYTRVPRNIKSLSDIQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYEFKKQTS
PQQIKSLLGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLR
SQKIVYISCGEDHTATLTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIA
CGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNWLPYDGRLPLKSDGEE
YYCVKRIFSGGDQSFSHYVTPQDSVPADDFRYPYASRQIWTVNEGFIQRLLNCSSSGAGR
LPAEIANEIDGTFSSSGSLNGSFLAVSNDDHYRTSARFSGVDMNAARLLFHKLIQSEHPH
ISQQVAASLEKNLIPKLTSSLPDVEALRLFLTLPECPLMSDANNYMTLAIPFATATVNLE
KAPLKVLENWWSVLEPPLFLNIVELYKDVVVHLLKLYKMGIPASEQRIFTSCLHSSLKVL
EILHRVNERGGQIIQYDKFYIHEIQDLIDIRNDYFNWIQQQAYGMLADVPVTICTYPFVF
DAQAKTTLLQTDAVLQMQMAVDQAHRQNFSSIFLPVFESVNPCLILIVRRDNIVGDAMEV
LRKTKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFS
DKTFEDSDLFHLIGVVCGLAIYNFTIVELHFPLALYKKLLNKKPTLEDLKELMPDVGRSM
QQLLDYPEDDIEDTFCLNFTITVENFGATEVKELIPNGADIPVVKQNRQEFVAAYVDYIF
NKSVASLYDAFHEGFHKVCGGKVLQLFQPNELQAMVIGNTNYDWKELEKNTQYKGEYWTE
HPTIKMFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLSLVIQPTGGGEGYLPVSHTC
FNLLDLPKYTDKEVLKAKLIQAIDHCEGFNLV
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgttatgttggggaaatgcctcttttggacagcttggattgggaggcattgatgaagag
gtagtcctagaacccagaagatgcaacttcttcctaaacaaaaaggtccgagatgtaggc
tgtggactaaggcacactgtgtttgtcttggatgatggaactgtatatacatgtggatgc
aatgatttgggacaattaggacatgaaaaatccaggaaaagaccagagcaggttggtgcc
ttggatgctcaaaatattgtagcagtttcatgtggagaagcccacacattagcattaaat
gacaagggtcaagtctatgcttggggtcttgctgtagatggacagcttggcttgccggga
actgaggaatataccagagtacccagaaacattaaaagcttgtcagacattcaaatagtt
caagttgcctgtggctactatcattcacttgcactctccaaaggaagtgaagttttttca
tgggggcagaataaacatggtcaactaggtttaggatatgaattcaaaaagcagacatcc
ccacaacagatcaaatcattactagggataccttttgcacaaattgcagcaggtggtgca
catagctttgcccttactctttctggagctgtctttgggtggggccgtaacaaatttggt
cagctcggtcttaatgatgaaaatgacagatatgttcccaatcttctaaaatcacttaga
tcccagaaaattgtttacatctcctgtggagaagatcatactgcaactcttacaaaggaa
ggtggcgtatttacttttggagctggaggctatgggcaattaggtcataactctactggc
catgagataaacccaagaaaagtttttgaacttatgggaaacatcgtcacacaaattgcc
tgtggaaggcagcacacgtctgcatttgttccttcaactggaagaatttattcttttggt
cttggaggtaatggacagttaggtatgggatcaactagtaacaggaaaagccccttccca
gtgaaaggaaactggcttccttatgatggacgattaccattaaagtcagatggtgaagaa
tattactgtgtaaaaagaattttctctggtggagaccaaagcttttcacattatgttact
ccacaggattcagtaccagcggatgacttcagatacccttatgcttcaaggcaaatatgg
actgtgaatgagggcttcattcagagattgctgaactgctcatcttcaggagcagggagg
ctccctgcagagatagcaaatgaaatagatggaacattttcttcatctggcagtctgaat
ggaagctttttagctgtcagcaatgacgatcactacagaactagtgccagattctcaggg
gttgatatgaacgctgctcgacttctgtttcacaaacttatacagtcagagcatcctcat
atatctcaacaggtggcagctagtttggagaagaaccttatacctaaactgactagttcc
ctgcctgatgttgaagccctaagactttttctaaccctcccagaatgcccactaatgagt
gatgcaaacaattacatgacactagctattccatttgcaactgctactgtgaatctagaa
aaggctccactgaaagtacttgagaattggtggtctgtattggagcctcccttattcctc
aatatagtggaactttacaaagatgttgtagtccaccttctgaaattgtacaagatgggc
atccctgcttcagaacaaagaatctttactagctgtctacacagttctctcaaggttttg
gaaattttgcatagggtaaatgaaagaggtgggcaaatcattcagtatgataaattctac
atacatgaaatacaggatttgatagacataagaaatgattacttcaattggatccaacag
caggcatatggaatgttagcagatgtgccagttacaatttgcacctatccctttgtgttt
gatgcacaggcaaagaccacacttttgcaaacagatgccgttttacagatgcagatggct
gttgaccaggctcacagacagaatttttcatctatttttctcccagtatttgagtctgtc
aatccatgtctgatcttaatagtgcgcagagacaacattgtgggggatgccatggaagtc
ctaaggaaaacaaaaaatgtggactacaagaagcctctgaaggtcatttttgtaggagaa
gaagccgttgatgcagggggagtccgcaaagaatttttcttactgatcatgagagagctg
ttagatcccaagtatggaatgttcaggtattatgaagactccaggctcatttggttctca
gataagacatttgaagacagtgacttgtttcacctgattggtgttgtctgtgggctagca
atatataattttactattgtagagcttcattttcccttggctttgtataagaaacttctg
aacaagaaacctaccctggaggacctcaaagagctaatgcctgatgttggcaggagtatg
cagcagttactggactatccagaagatgatatagaagatactttctgcctcaactttaca
atcactgttgaaaattttggtgccacagaagttaaagagctaattcctaatggtgctgat
attcctgttgtcaaacaaaataggcaagagtttgtggctgcttatgtggactacatcttc
aataaatccgtggcttctctctatgatgcattccatgaaggctttcacaaggtgtgtgga
ggtaaagttctgcagctcttccaacccaatgaactgcaagcgatggtgatcggtaacaca
aactatgactggaaagaattagaaaagaatacacaatacaaaggagagtattggactgag
catccaacaattaaaatgttctgggaagtttttcatgaattaccattggaaaagaagaaa
caatttttgttatttttgacaggtagtgaccgtattcctattcttgggatgaagagcctt
agtctggttatccagccaacaggaggtggagagggatatcttccagtatcccatacatgt
tttaatcttcttgatctcccaaaatatactgacaaagaagtgctgaaagccaagttgatt
caggctattgatcactgtgaaggcttcaacttagtataa
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