KEGG   Varanus komodoensis (Komodo dragon): 123018482
Entry
123018482         CDS       T07701                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
vko  Varanus komodoensis (Komodo dragon)
Pathway
vko03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:vko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    123018482 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vko03021]
    123018482 (TAF5L)
   03036 Chromosome and associated proteins [BR:vko03036]
    123018482 (TAF5L)
Transcription machinery [BR:vko03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     123018482 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     123018482 (TAF5L)
Chromosome and associated proteins [BR:vko03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     123018482 (TAF5L)
    STAGA complex
     123018482 (TAF5L)
    TFTC complex
     123018482 (TAF5L)
    SAGA complex
     123018482 (TAF5L)
    SLIK complex
     123018482 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_Aladin ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_SPT8 Tricorn_2nd Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR19_1st PEP5_VPS11_N PROPPIN Ge1_WD40 Beta-prop_IP5PC_F WD_LRWD1 eIF2A Mala_s_1-like Beta-prop_DCAF12 Nbas_N
Other DBs
NCBI-GeneID: 123018482
NCBI-ProteinID: XP_044276573
LinkDB
Position
Unknown
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANIVSA
APCLADPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLHMVQNGLKSTVDSFY
SRFHGMFLQNVSQKDIIEQLQTTLTIQDILSNFKLRAFLDNKYVVRLQEDSYNFLLRYLQ
SDNNNALCKVLSLHIHLDVQPAKRMDYQLYASGGSSRSESNGLEPTDMPASILQNEAALD
ILQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCVKLWSLRAK
KLKSEPHLVDVSRIRLACDILDEEDEEDDNVGTEMKMLRGHCGPVYSTKFLSDSSGLLSC
SEDTSIRYWDLGCFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNTVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPVDGSSSELVGVYTGQINNVLSVQFMACNLLLVTGIAQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgcgtacgcacagaacagattcagatggcagtttcctgctacctcaaacgcagg
cagtatgtagattcagaaggtcctctgaaacaagggctccgcttatgccagactgcagaa
gaaatggcagctaatctaacagttcaatctgaatcgggttgtgcaaacattgtctctgct
gcaccctgcctagcagatccgcaacaatatgaagtacagtttgggcgactgcgtaatttt
cttacagattcagattcccagcacagccatgaagtgatgcctcttctgtacccccttttt
gtctacctccatcttcacatggttcagaatggcctaaagagcacagtggacagtttctat
agtcgcttccatgggatgttcttgcagaacgtcagccagaaggatataattgagcagtta
cagaccacactcacaattcaagacatcttgtccaacttcaagctccgggcatttctggac
aacaagtatgtcgtccgtcttcaagaagacagctacaactttctccttcgctacctccaa
agtgacaacaacaatgctctttgcaaagtcctctccttgcatattcacttagatgtgcag
ccagccaagaggatggactaccagctttatgctagtggtggctcttcacgcagtgagagc
aatggtctggaacccactgacatgcctgcttccatcctgcagaacgaggcagccttggac
attctgcaggatagcattaaaagagtcaaagatggaccaccttctctcaccacaatatgt
ttctatgcgttctataacacggagcagttgttaaacacagctgagatctcaccagatagc
aagctgcttgctgctggctttgacaattcctgtgtgaagctgtggagcttgcgggccaag
aaactgaaatctgagccgcatctggtagatgtatcccgaatccgcctggcttgtgatatc
ttggatgaggaggatgaagaagatgataatgtgggtacagaaatgaagatgctaagagga
cactgcggaccagtgtacagcacaaagtttctgtcagacagctcaggactgttgtcatgt
tctgaagacacttctatcagatactgggaccttggatgttttacaaacactgtgttgtac
caaggacatgcctaccctgtgtgggacctggacatcagcccttgcagcttgtactttgcg
agcgggtcacatgaccgcacagcaagactctggtcatttgatcggacgtatccactgcgg
atatatgcaggccatttggcggatgtggactgcattaaatttcaccccaactctaactat
ttagcaacaggatccacagacaaaacagtgcggctctggagtacccagcaaggaaacaca
gtacgcctgtttacaggtcatcggggccctgtactgtctctcgcattttctccaaatggt
aagtatttggcttcagcaggcgaagaccagcggttaaagctatgggacttggcatctggc
acgctttataaagaattgagagggcacacggataatatcaccagccttacatttagtccg
gacagtagcttgattgcttctgcatcaatggacaactctgttcgggtttgggacattcga
aacacttactgcaacgctcctgtagatggctcttccagtgaactagttggtgtatatact
ggacagataaataatgtactgagtgtacagttcatggcttgtaaccttcttttagtgact
ggaattgcacaagagaatcaggaacattaa

DBGET integrated database retrieval system