Varanus komodoensis (Komodo dragon): 123018570
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Entry
123018570 CDS
T07701
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123018570 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123018570 (PATL1)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123018570 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
123018570 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
123018570
NCBI-ProteinID:
XP_044276716
Ensembl:
ENSVKKG00000014597
UniProt:
A0A8D2LHL4
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MFRYQSLEDCRLDEDEEAFHNLAEEDEDIDQFNDDTFGAGAVDDDWQQAHERLAELEEKP
ASSEEQVDQGVADEMDLLGDHEENLAERLSKMVIDNELEDPAIMQAVQTQPPVQQPSSLN
SSIWDGPSVLRRIRGPLLTQEVPSVSVLEYALPQRPPQAREEEQDLSERALPRRSSSPVI
GSPPVRAVPIGTPPKQPTMPNFNQQQILCPKPVHIRVPIQQRYPSPFNERMSPNHLCNVT
NSSLLGHPFPPSVTPVLTHLQRAQLLGGAQAGRMSPSQFARVSGLVSSPLASMNPKLLQG
RVGQMMPPASGFRAFFGAAPTPSSQHHTPCPGAHLQNIRPQPQIFRPDTTHLHPQHRRLL
HQRQQQNRNQHRNLNGSVGDRGNHRNNHQEQIRKDPYSNLMLQREKDWVSKIQMMQLQST
DPYLDDFYYQNYFQKLEKLSAAEEMHGDGPKKERTKLITPQVAKLEHAYKPVQFEGSLGK
LTVSSVNNPRKMIDAVVTLRGEEDETKEKQVRDKRRQTLFTIEKTYSLLLDVEDYERRYL
LSLEGDRLALMEERKQKICDMYDNLRGKMPNQERLSDDPFVQIMCIRKGKRLVARILPFL
PTEQAADILMATSRNLPFLIKKDAQDEVLPCLLRPFSLVLYHLPLGTVAGILQQLMNLPQ
STTSTASANLHLTAVLQNKFGLSLLYLVLSRGEELQSSDTTTELMQDNQWMELMCMATRE
LLRIPQAALAKPVSTPSNLLSLFSRYVDQQKLNVLETKLQLIQGIR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctaccagtccctcgaggattgccgtctagatgaggatgaagaagcatttcat
aatttggcagaagaggatgaagatattgaccaattcaatgatgatacatttggagctggt
gcagttgatgatgactggcagcaagcccatgaaagactggcagagctggaagaaaagcct
gcatcttcagaagagcaagtggaccagggagttgcagatgagatggacctgctgggagac
catgaagagaacctggcagagaggctgagcaagatggtgattgataatgagctggaagat
ccagccatcatgcaagctgtgcaaacccagcccccagtacagcagccaagtagcctcaac
tcaagcatctgggatggtccttcagttctcaggcgcattaggggacctcttctaactcag
gaggtgccctctgtatcagtgctggaatatgccctgccacagaggcctccgcaggcccga
gaagaggagcaggacctgtcagagcgggcactacccaggcgctcatcctcgccagtcatt
ggcagtcctcctgttagagctgttcccatcgggaccccgcctaagcagcccaccatgccc
aactttaaccagcagcagatcctgtgtccaaagccagtccacatcagagtcccaattcag
cagcgttacccgagtcccttcaatgagaggatgtctccaaaccatctctgcaacgtgacg
aattcctccctcctgggccacccgttccctcccagtgttacacctgttctcacccacctc
caaagggcacagctgttaggaggagcacaggcaggcagaatgtctcccagccaatttgca
cgggtctcgggtcttgttagcagccctcttgcatctatgaaccccaaattgctccagggc
cgagttgggcagatgatgcctccagccagtgggtttcgtgccttctttggggcagcacct
acaccatcgtcacaacaccacacaccatgtcctggagctcacttgcagaacataaggcct
cagccacagatattcaggccagacacaacccaccttcatccccagcaccggcgactctta
caccagaggcagcagcagaacaggaatcagcaccggaacctaaatgggtcggtaggagac
cgagggaaccaccgaaataaccatcaggagcagataaggaaggacccatattccaatctc
atgttgcagcgggaaaaggactgggtgtccaagatccagatgatgcaactgcaaagcact
gatccatacttggatgacttctactaccagaattattttcagaagctggaaaagctgtct
gcagctgaagagatgcacggtgatggtcctaaaaaagaacgtactaaactgatcacccca
caagtggcgaagttggagcacgcctacaagccagtgcagttcgagggctccttggggaag
ctcacggtctccagtgtgaataatccccgcaaaatgattgatgcggtagtgacgttacga
ggtgaagaagatgagacaaaagagaagcaggttcgcgataaaaggcgccagactctgttc
acaattgagaagacatacagtcttctcctggatgtggaagattatgagaggagatacctc
ttgagtctggaaggtgataggctggccttgatggaagagaggaagcagaagatctgtgat
atgtatgacaatctgagggggaagatgcctaatcaggaaaggctgagcgatgaccctttt
gtgcagattatgtgcattcggaaaggaaagcgtctagttgcccggatcctgccctttttg
cccactgagcaagcagctgacatacttatggctacatccaggaacttgcctttcctaatc
aagaaagatgctcaagatgaggtgctaccttgcctgttgaggcccttctcccttgttctc
tatcatcttccactgggaacagttgccggcatcttacagcaactaatgaacctacctcag
agcacaacatcgacagcatccgccaacctacacctcacagctgtgcttcagaataagttt
ggcctttctctgctgtacttagtcttgagccgtggagaggaactacagagttcagatact
actacagagctcatgcaagacaaccagtggatggaactgatgtgcatggcaaccagagag
cttctccggatccctcaggcagccttggccaagccggtgtctaccccctctaacctttta
tctctgttctcccgctatgttgatcagcagaagctgaatgtgctagagacaaagttgcag
ttgattcaaggaatacggtag
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integrated database retrieval system
