Varanus komodoensis (Komodo dragon): 123018602
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Entry
123018602 CDS
T07701
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123018602 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123018602 (CLP1)
Enzymes [BR:
vko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
123018602 (CLP1)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
123018602 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
AAA_18
MMR_HSR1
ATP_bind_1
TniB
AAA_22
AAA_16
CbiA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
123018602
NCBI-ProteinID:
XP_044276804
Ensembl:
ENSVKKG00000014620
UniProt:
A0A8D2Q5W6
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MAEEAGDDKKLVAKFELERETELRFEVEASQTVQLELMTGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSVQLTGRTEVAYVSKDTPMLLYLNTHTALEQMRWQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSISIPGTMGALYIERPADVEEGFSV
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRREFRDDR
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTADGTDENISETSVAGFIVVTAVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaagctggggatgataagaaactggtggccaagtttgagctggagagggag
acagaacttcgctttgaggttgaagcctcacaaactgtccagctagagcttatgacaggc
atggctgagatctttggaacagagctgacacgtaacaagaaattcacctttgatgctggt
gccaaagtggctgtcttcacctggcatggctgttcagtacaactgactggtcgaactgaa
gtagcctatgtctctaaggacacacccatgttgctctacctcaacacccatacagccctg
gagcagatgcggtggcaggctgagcgtgaagatgaacgggggcctcgggttatggtggtg
ggccccacagatgtgggcaagtcaactgtctgccgcctgctgctgaattatgctgtgcgt
ctagggcgccgacccacttttgtggagctggatgtaggccagggctcaatctctatccca
ggcactatgggagcactttatattgaacgacctgcagatgttgaagaaggattttcagtt
caggcccctctagtctatcactttggctccaccacacctggcactaacatcaaactctat
aataagatcacatctcgcttggctgatgtatttaaccaacgctgtgaggtgaaccgccgg
gcttcagtcagtggctgtgtcatcaatacctgtggctgggtgaagggatctggctaccag
gcacttgtacatgctgcctccgcctttgaagttgatgttgtagtagtgctggaccaggag
cgcctctacaatgaactgaagcgagacctgcctcactttgttcggacggtgctgctccct
aagtcaggtggagtggtggaacgctccaaggacttccgacgggaatttcgtgatgaccgc
atacgtgaatacttctatggcttccgtgggtgcttctacccacatgcctttgatgtcaag
ttctctgatgtcaagatatacaaggtgggagcacccacaatccctgactcatgtctgcct
ctgggcatgtcacaagaagacaaccagctcaagctggtaccggttacacctggtcgtgat
atggtgcaccacttgttaagtgtgagtacagctgatggtacggatgagaacatctctgag
actagtgtagctggttttattgttgtcactgcagtggatctggaacgtcaggtgttcact
gtgctttcaccagcacctcgtccattgcccaagaactttttactcattatggacattcgt
ttcatggatctcaagtag
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integrated database retrieval system
