Varanus komodoensis (Komodo dragon): 123018751
Help
Entry
123018751 CDS
T07701
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123018751 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vko04121
]
123018751 (TRIM54)
Ubiquitin system [BR:
vko04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123018751 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
RHH_9
Sina_RING
DUF1664
Zn_ribbon_FGT1_2
DUF5799
Motif
Other DBs
NCBI-GeneID:
123018751
NCBI-ProteinID:
XP_044277032
Ensembl:
ENSVKKG00000005247
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MNFAVGFKPMLGTSQSMDSLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSSSVSSSGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHAKA
EQQLLCEEHEDEKINIYCLTCETPTCSMCKVFGAHKDCDVAPLSSVYKRQKGELSDGIAM
LVAGNDRAQAIISQMEEICKTIEENARRQKQHLCLRFDSLYGILEERKKELLQEIGREQE
EKVQLVRGLIRQYGDHLESSSKLVESAIQSMEEPQMAVYLQQSKELIKKITDMSKVSMSS
RPESGYENMDHFSVNVDHVAEMLRTIGFHPASDTAGENTEPEGLSPEGGGEAGDEEHLEG
PSTTEGTEDVEAPPRIRPKPAGGAHAAPH
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgccgtgggcttcaagccgatgctcgggacctcgcagagcatggacagcctg
gagaagcagctgatctgccccatctgcctggagatgttcaccaagccggtcgtgatcctg
ccttgccagcacaacctgtgccgcaagtgtgccaacgacatcttccaggcctccaacccg
ctctggcaatcccgcgggtcaagctcggtgtcctccagcggccggttccggtgcccgtcc
tgccggcacgaggtggtgctggatcggcacggcgtgtacgggctgcagcgcaacctgctg
gtggagaacatcatcgacatctacaagcaggagtcctctcggcccctccacgccaaggcg
gagcagcagctgctgtgcgaggagcacgaggacgagaagatcaacatctactgcctgacc
tgcgagacgcccacctgctccatgtgcaaggtcttcggggctcacaaggactgtgacgtc
gcccccctgagcagcgtctacaagcgccagaagggggagctgagcgacggcatcgccatg
ctggtggccggcaacgaccgggcccaggccatcatcagccagatggaagagatctgcaag
accatcgaggagaacgctcggcggcagaagcagcacctctgcctgcgcttcgactcgctg
tatggcatcctggaggagcgcaagaaggagctgctgcaggagatcgggcgcgagcaggag
gagaaggtccagctggtgcgggggctcattcgccagtacggggaccacctcgagagctcc
tccaagctggtggagagcgccatccagtccatggaggagccccagatggccgtctacctt
cagcagtcgaaggagctgatcaagaagatcacagacatgtccaaggtgtccatgagcagc
cggccggagtctggctatgagaacatggaccacttttctgtgaacgtggatcacgtggct
gaaatgctgaggacaataggattccacccagcatccgacactgctggggagaacacggag
ccggaaggactcagcccggaggggggcggcgaagcaggcgacgaggaacacctggagggg
ccgagcaccaccgaggggacagaagatgtagaggccccgccgcggatcaggccaaagccg
gccggcggcgcccacgcggctccgcactga
DBGET
integrated database retrieval system
