Varanus komodoensis (Komodo dragon): 123019012
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Entry
123019012 CDS
T07701
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vko03041
]
123019012 (DDX43)
Enzymes [BR:
vko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123019012 (DDX43)
Spliceosome [BR:
vko03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123019012 (DDX43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH-I_KHDC4-BBP
C_GCAxxG_C_C
CMS1
KH_2
Motif
Other DBs
NCBI-GeneID:
123019012
NCBI-ProteinID:
XP_044277384
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MSDWEADSDEDECRGKLKEPSLDDWRPATALLKRPAGNRPAGGGEKWGSRLAPGGEPWQS
GPLEYRARVRGDRERAGFPPLCFHLDNALVGTLIGRGGTKIKELEESSGCKIKVVKGNYE
AEIKILGDRDKQTKAKTLIDDLVERYSQSTAGERHIKGSFKQQGVGTNCYSETSSGALKS
GYSNTKQPINWAYLRENKAKYEAIKWADLPPIEKHFYKESPKIASMSQEVADRWRKENNN
ITCNDLKDGEKRCIPNPICEFEDAFRHYPDIMVNIRKVGFQNPTPIQSQAWPIILQGFDL
IGIAQTGTGKTLAYLMPGFIHLDLQPVPREKRGGPGMLVLTPTRELALQVEAECSKYSYK
GIKSICIYGGGDRKGQINVVTKGVDIVIATPGRLNDLQMNNFINLRSITYLVLDEADRML
DMGFEPQIMKILLDIRPDRQTVMTSATWPDGVRRLAKSYLKDPMIVYVGTLDLAAVNTVE
QKIVVIPEEEKRAFTRYFIDAMKSGDKIIIFVGKKLTADDLSSDFGLQGIPVQSLHGNRE
QCDREQALEDFKKGRVRILIATDLASRGLDVQDITHVFNYDFPRNIEEYVHRVGRTGRAG
RTGVAITLVTKKDWRIASELIDILERGNQVVPEELISMAERYKQFRLKKDMERDLGRPHG
RSRKGF
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactgggaggcggacagcgacgaggatgaatgccgcgggaagctcaaggagccc
tccctggacgactggcgcccggcgacggctcttcttaagcggcctgctgggaaccgaccc
gcgggcggcggggaaaaatggggttcgcggctggcgcctggcggcgagccctggcagtca
gggcccttggagtatcgagcccgagtccgaggagacagggagcgcgcggggtttccgccg
ctctgcttccacctggataacgcgctcgttggcacgctcataggtcgtggtggcactaaa
ataaaagaacttgaggaatcctcaggttgtaaaataaaggttgtaaagggaaactatgaa
gctgaaataaagatacttggtgacagggataagcaaacaaaagccaaaacattgattgat
gatcttgttgaaaggtatagtcaaagcacagcaggagaaagacacattaaaggttccttt
aaacaacaaggtgttggaacaaattgctacagtgagactagttctggagctttgaaatct
ggatacagtaatacaaagcagcctattaattgggcctaccttcgagaaaacaaagctaaa
tatgaagctattaagtgggctgatttacctccaattgaaaaacatttttataaagaatca
ccaaagattgcttctatgtcacaagaagtagctgataggtggagaaaagaaaacaataat
atcacatgtaatgacctgaaagatggggaaaagaggtgtattcctaatccaatctgtgaa
tttgaagatgcttttaggcattatcctgacatcatggtgaatataaggaaagttgggttt
cagaaccctaccccaattcagtcacaggcttggccaattatacttcaaggatttgatctc
attggaatagcacagactggtactggaaagacgttggcttatttaatgcctggattcatt
catttggatttacagccagtacctagagaaaaacgtggtggaccaggtatgctcgttctt
actcccactagagaattggctcttcaggttgaggcagagtgctcaaaatattcttataaa
ggaattaaaagcatttgcatatacggtggtggagatcgaaaagggcaaatcaacgtggtt
accaaaggtgtggacatcgttattgctactcctggtagattgaatgatcttcaaatgaac
aacttcataaatctgaggagcataacatacttggtattggatgaagctgatagaatgctg
gatatgggatttgagcctcaaataatgaagattttattagacatacgtcctgacagacaa
acagttatgactagtgccacatggccagatggtgttcgtcgtcttgcaaaatcatatttg
aaagatcctatgatagtgtatgttggtactcttgatttagcggcagtaaatacagtagag
cagaagattgttgttattccagaagaagaaaaaagagccttcacacgttacttcattgat
gctatgaaatctggagacaaaatcatcatttttgtgggaaagaaacttactgctgatgac
ctgtcaagtgattttggtcttcagggaattccagttcagtccttacatggtaatagagaa
caatgtgatcgtgaacaggctttggaagacttcaagaaaggcagagttcgtatactgata
gcaactgatttagcctctcgtggacttgatgtgcaagacatcactcatgtttttaattat
gactttcctcgcaacattgaagaatatgttcatagagtaggccgtactggacgagcaggg
cgcacaggagtagctataactcttgtgactaagaaggactggaggattgcatctgaattg
attgacattctggaaagaggaaaccaggtagttcctgaagagctaatttcaatggctgag
agatacaagcagtttcggttgaaaaaagacatggaaagagatttaggaagacctcatggg
agatcacggaagggtttttga
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