Varanus komodoensis (Komodo dragon): 123019216
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Entry
123019216 CDS
T07701
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123019216 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vko03021
]
123019216 (SMARCC2)
03036 Chromosome and associated proteins [BR:
vko03036
]
123019216 (SMARCC2)
Transcription machinery [BR:
vko03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123019216 (SMARCC2)
Chromosome and associated proteins [BR:
vko03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123019216 (SMARCC2)
PBAF complex
123019216 (SMARCC2)
GBAF(ncBAF) complex
123019216 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
BRCT_2
Motif
Other DBs
NCBI-GeneID:
123019216
NCBI-ProteinID:
XP_044277836
Ensembl:
ENSVKKG00000005325
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDSARVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCQILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIYLHPDIDPKLQAKLKDIIKRHQGTVTEDKNNASHIVFP
VPSSLEEEEWVRPIMKRDKQVLLHWGYYPDSYDTWIPASEIEAPVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDEKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEPEDESMETTGKDEEENNAGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDSDTKTGRKSKEIEDLVTDTVKGKPEMQTTASQQMLNFPDKSKEKP
PDMQNFGLRTDMYTKKNAPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDELE
RIEESCTDENRAEPPPSEEKKEEQREGSLEEEVKEKLGEVPRKEEDKNKEADGEKEMDKS
DGDTMADGEKEKEPKDGQEEGPKDLAETEGERKTKVERDIGEGNLSTAAAAALAAAAVKA
KHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQA
FHMEQLKYAEMRARQQHFQQMHQQQQPPPPPPPSLPGGSQPLPSSGAPLASAAHSIPISQ
TSVPAASTIGQPSSMAQTEQIGQPVAVQPQQTAAGAPPTGPGQTGQPPTGSHAQPPFPSQ
QPSSQILPGAVPATVHPAMAGNIPSTLPFGMPASIPLSMASNVTDSIGINFPANMPIHPV
HGNLACSMANPPIINVSSTLHPAAAPLPHGSAAAQSPAIVAAMQGSLLPNAGLGSDQGPS
LQSDPITPSPNTATPVPPTQ
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccctaacgtcaagtactacgaggcctcagacacc
gttagccagttcgacagcgcgcgcgtctggttgggcaagaactacaaaaagtatatccaa
gcagagccacctaccaataagtcattgtccagtctagttgtgcagctgcttcagttccaa
gaggaggtatttgggaaacatgtcagcaatgcaccactaacaaagttaccaattaaatgc
ttcttagatttcaaagctgggggtgccttgtgtcagatccttgcagcagcttataaattc
aagagtgaccagggatggcggcgtttcgatttccagaatccatcacgaatggatcgcaat
gtggaaatgttcatgaccattgaaaaatctttggtgcagaacaattgcctttcccgacct
aacatctatttgcatccagacattgaccctaaattgcaggccaaactgaaagatataatc
aaacgacaccagggaacggtaactgaagataagaacaatgcttcccatatcgtcttccct
gttcctagtagcctagaggaagaagaatgggttcggcctattatgaagagagacaagcaa
gtcctcctgcactggggctactatcctgacagttatgacacctggatcccagcaagtgaa
attgaagcccctgtggaggatgcccccacaccagagaaaccccgtaaggttcatgctaaa
tggatcctggacacagatactttcaacgagtggatgaatgaagaagactacgaggtaaat
gatgagaagagccctgtgtcccgtaggaagaaaatatctgccaagactctcaccgatgag
gttaacagtccagactcggaccgaagggacaagaaggggggaaactataagaaaaggaag
cgttctccctctccttcacctactccagaagctaagaaaaagaatgccaagaaagggcct
tccactccctacacaaagtccaagcgcggccatcgtgaggaggagcaagaagaccttacg
aaagacatggatgagccttctcccgtccccaatgttgaagaagtcacactaccaaaaaca
gtcaacaccaagaaagactctgaatctgctcctgtgaagggtggcaccatgactgatttg
gatgagccagaggatgagagcatggagacaacaggcaaagatgaagaggagaacaatgct
gggaacaaaggggagcagacaaaaaacccagatctgcacgaggacaatgtgacagagcag
actcaccacattatcatccccagctatgcagcctggtttgactataacagcgtccacgcc
atcgagcggagagccctgcctgagtttttcaatggcaaaaacaagtcaaagactccggaa
atatacttggcataccgcaatttcatgattgatacctaccgactgaatccacaggagtat
ctaacctcaactgcttgccgccggaatctggcaggggatgtctgtgccatcatgagagtc
catgcctttctggagcagtggggactgattaactaccaggtggatgcagagagccggcca
accccaatgggaccaccacctacatcacatttccatgttttggctgacactccttcagga
ttggtgccattgcaacccaaaactccccagggtcgtcagagtgatagtgacaccaaaact
ggacggaagagcaaggagattgaagatctcgtcacagacacagtgaaggggaaaccagag
atgcaaaccacagcttctcagcagatgctgaacttccctgacaagagcaaagaaaaacca
ccagatatgcaaaactttggacttcgcactgacatgtacactaagaaaaatgctccttcc
aagagcaaagctgctgcgagtgctacccgtgagtggacagagcaggagacattgttattg
ctggaggcactggagatgtacaaagacgattggaacaaggtttctgagcatgttggcagc
cgcacccaggatgagtgcattctgcacttcttgcgtcttcccattgaggacccctacctg
gaggactctgaggcctcacttggacccctagcctaccaacccattcccttcagccagtcg
ggcaatcctgttatgagcactgtggccttcctggcttctgtggtggacccccgtgtagca
tccgcagcagccaagtcagctctagaggagttctccaagatgaaggaggaggtgcccaca
gccttggttgaagcgcatgttcgcaaggtggaggaagctgccaaggtgacaggcaaggca
gacccagcatttggtctggagagcagtggaattgcagggaccacctctgatgagctggag
agaatagaagaaagctgcacagatgaaaaccgggcagaaccacctccatctgaggagaag
aaagaggaacaaagagaaggatccctggaggaggaagtgaaggagaaacttggagaggtg
cctaggaaggaggaagacaaaaacaaagaggctgatggcgagaaggagatggacaaaagt
gatggggacacgatggctgatggagaaaaggaaaaggaacccaaggatggtcaggaggag
ggacccaaggaccttgcagagacggagggtgagcgaaagaccaaggtggagagagacatc
ggcgaaggtaacctctccactgcagctgctgctgctttggctgctgcagcagtgaaagca
aagcacttggctgcagtggaagagcgtaaaatcaagtcactggttgccttgttggtggaa
acacagatgaagaagcttgagattaagttacggcactttgaggagctagagaccatcatg
gatcgggaacgtgaggcacttgagtaccagaggcagcagctcctggctgaccgtcaggct
ttccacatggagcagctcaagtacgccgagatgcgagctcgccagcagcatttccagcag
atgcaccagcagcagcagccgccgccgccgccaccaccctctctccctgggggctcccag
cctctcccttcttcaggggctcccctggcatcagctgctcactccattcccatcagccag
acatcggtgccagctgccagtaccataggacagcccagcagtatggctcagacagagcag
attgggcagcccgtggcagtgcagccacagcagacagcagctggagcaccaccaactggc
ccgggccaaactggacagccacccacaggttcccatgcccagcctccgttccctagccag
cagccatcatcccagattcttcccggggcagtcccagcaaccgttcacccggccatggct
ggtaatatcccctcgactctgccttttggaatgcctgcctccatcccacttagcatggct
agtaacgtaacagactccatcggcattaacttccctgctaacatgcccatccatccagtg
catggtaaccttgcgtgcagcatggctaatccgcccatcatcaacgtctctagcaccctg
caccctgctgccgccccactgccgcatggttccgcagctgcccagagcccagctattgtg
gctgcaatgcagggcagcctccttccaaatgctggtcttggatcagatcaaggaccttca
ctgcagtcggatcctatcactcctagccccaacacggccacaccagtcccacctacacag
tga
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integrated database retrieval system
