Varanus komodoensis (Komodo dragon): 123019458
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Entry
123019458 CDS
T07701
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vko03021
]
123019458 (SCAF8)
03041 Spliceosome [BR:
vko03041
]
123019458 (SCAF8)
Transcription machinery [BR:
vko03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123019458 (SCAF8)
Spliceosome [BR:
vko03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123019458 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
DUF3525
Motif
Other DBs
NCBI-GeneID:
123019458
NCBI-ProteinID:
XP_044278287
Ensembl:
ENSVKKG00000017599
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MEQIGSLSCQDFKELPRFLLYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFI
QKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIV
RVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLPGTTASMSNNTPGTPVTPATPANV
IQNLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQMQQQKPQPSILQALDAGLV
VQLQALTAQLTAAAAAANTLNPLEQNVSFNKKLMDRFGDFGEEPDINEEPKKENPASQLP
LVPESVNNSLFHQLAEQLQQQNIEHLRQQLLDQQPPKASPEETQEENFGSEHSASPSQDS
SHQQFLEVETNLDNSMDVQQQDMDIDEGQEVVEQEVFEQEEKKSAVLSRSRTHSRSRSRS
PRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSK
TLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQ
KLSSGSYKIGSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLDGFAEGGMI
DQETVNSEWETARSSEPVKEPVQTTQSTTVDKTTAVTTQAESTYTQSVTMLQIPVAPTVP
AVSLVPPAFPVAMSVPPPGYSAIPPPPFLRASFNPSQPPPGYMPPPVPPPVPPPVVPASL
VQPSLPIAQESMKDFSSLVLPVGTVSSSLTTPTLSAGGVFTPLSSNNTELDENGSHHADL
QISSSESRAVQDDVSSSSALIGGVQPPSVSTSSGLVGGMQPPSVSSNSGLVQPPSVSSSS
GLLPRVQPSSASNSSGLLTGVQPPSVSGSSGLLTGLQPMSVSSSSSLLMGLQPPIVSSNS
GLLSGIQPPIVSSSSGLLTALQPPIASSNSGLLGLPPPIVSSGTGLLGLPPPNLSSGSGL
LGLQPPTGIQNLPHLTITSQRLPGMPLVDIRSGLMPQPPGPRFPLLQPGIPPQRNIPPPA
ILDPSLPPPRAPFLSGDIFTQSERPFGPSGRQSADNISNPDKRMPLGDDSMQQEGDRDYR
FPPVESRENLNRSSSVDIRDSVGRAPLDPREGLGRPPVDGREHLARPHLDLRENFGRSGM
DNLGRRDHFAFNSDKHWGQRGDYDEREHHAFPIYGGLKGFPEDRERYRQTNYRFESRSGP
SWNRGPEQDTHRDFDDRRRPWERQRDRDDRDFNFGREINGNRYGRERIQNNWIPPPHSRV
FEYFEGGTSQQKADSVPQVNGENAETEGQPSAVQVQDESELYEKLTTSSDTKKEKSDTEA
ELGSEPVVESTETEGT
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaatagggagcctctcttgccaagactttaaagagctaccacggtttctgttg
tactcgctgaatgactacaaacctcctatttcaaaggctaaaatgacacagattaccaag
gcagcaatcaaggctataaagttctacaagcatgttgtacaaagtgttgagaaattcatt
caaaagtgtaaaccagaatacaaggtgcctggcttatatgtaattgactctattgttcgg
cagtctcggcatcagtttggacaagaaaaagatgtctttgcacctaggtttagcaataac
atcattagcactttccagaatttataccgttgccctggagatgataagagtaaaatagtt
agagtgctcaatttgtggcagaagaataatgtgttcaaaagtgaaattatccagccacta
ttggatatggcagcaggaattcctcctcctgttgtgacccctgtcttgcctggaacaact
gcgtctatgagtaacaatacaccaggaactccagtgacacctgctacaccagccaatgtg
atccaaaatttacctgatccttgggtttctcagataactaatacagatacccttgctgct
gtagcacagatcctgcagagtccacaaggccaacagcttcagcagttaatacagacactg
caaatgcaacagcagaaaccacagccttcaatacttcaagcactggatgctggtcttgtt
gttcagctacaagctctcactgcacaacttacagctgctgccgctgctgccaatacactt
aatccactagaacagaatgtttcttttaacaagaagttgatggatagatttggagatttt
ggggaagaacctgacattaatgaagagcctaaaaaggaaaatccagcttctcaattgccc
cttgtacctgaatctgtaaacaactcgctttttcatcaactagctgagcaattacagcaa
caaaacatagaacatctccgccaacagcttcttgaccagcagcctccaaaggcaagtcct
gaggaaacacaagaagaaaattttggttctgaacattcagcctcaccatcacaagacagt
agccaccaacagtttttagaagtggaaactaatcttgacaattcaatggatgttcaacag
caggacatggatatagatgaaggccaagaggttgtagaacaagaagtttttgagcaagag
gaaaagaagtcagcagttctttcaagatcaagaacacattcaagatctcgttcaaggtct
ccaagaaaaagaaggtccaggtcacgatctggctctcgaaaacgtaagcatagaaagcgt
tcacgatctagatcaagggaaaggaagagaaaatcttcacgatcatactcaagtgaacga
agagctcgagaaagggaaaaagaacgacagaaaaaagggttgcctcccatacgatccaaa
acactaagtgtctgtagcaccacactttgggttggtcaggtggacaaaaaggccacacag
caagatttaaccaatttatttgaagaatttggacaaatagaatctataaatatgattcct
cctagaggttgtgcatatgtctgtatggttcacagacaggatgcttaccgtgctcttcag
aaactaagctctggatcctacaagattggatctaaaattattaagattgcatgggcttta
aataaaggggtgaaaaccgaatacaaacaattttgggatgtggatcttggagtttcctat
ataccttgggaaaaagttaaattggatgatttagatggctttgcagaaggaggcatgatt
gaccaggaaacagtaaatagtgaatgggaaactgcaagaagttcagagcctgtaaaagag
cctgtgcaaacaacccagagtacaacagttgacaagaccactgctgtcacaacacaagca
gaatcaacatacacacagtctgtcactatgttacagattcctgtagctccaactgtgcca
gctgttagtttagtcccaccagcatttcctgttgcaatgtctgttcctcctcctggctat
agtgcaattcctccacctcccttcttgagagcaagctttaatccttcacagccacctcct
ggttatatgcctcctcctgttccacctcctgttccaccaccagttgttccagcttctctt
gtacagccttcactaccaattgcgcaagagtcaatgaaagattttagcagccttgttctg
ccagtgggcactgtttctagtagtcttaccactccaacattatctgctggaggtgtcttc
actcctctttcaagtaacaacactgaattggatgaaaacggatctcaccatgcagatctt
caaatttcatctagtgaaagcagagctgttcaagatgatgtttcaagcagttctgcgctt
attgggggagtgcagccacccagtgtctcaaccagttctgggcttgttggaggaatgcag
ccgcctagtgtctcaagtaattctgggcttgttcagcctcccagtgtctcaagcagctct
ggacttttgccaagggttcagccatctagtgcttcaaacagctctgggctcctgacaggt
gtacagcctccaagtgtctcaggcagctctgggcttctgacaggactccagcctatgagt
gtctcaagcagctccagccttctaatgggacttcagcctcccatagtgtcaagtaactct
gggcttttgtcaggaatccagccacccattgtgtcaagtagttctgggcttttgacagca
ctccagccgcccattgcatcgagcaactctggccttctgggactgccgccaccaattgta
tcaagtggtactggactgttaggattaccaccaccaaatctttcaagtggttctggactt
ctaggactacagccacccactggaattcaaaatctaccccatttaactattactagtcaa
agattgcctggaatgcctctagtagatatccgctcagggctaatgccacagccacctggg
ccaagatttcctctattgcagcccggaataccaccacagcgtaatatccctcctccagct
atccttgatccatcccttcctccacccagagctcctttcctttcaggagatatttttact
caatcagagaggccatttggaccttctggtaggcaaagtgctgataatatttctaatcct
gataaaagaatgcctcttggagatgacagcatgcagcaagaaggagatagagactaccgt
tttcctccagtcgaaagtagagagaaccttaatcggtcgtcttcagtggatattagggat
tctgttggaagggcaccactagatccaagagagggtctgggaaggcctccagtagatgga
agagaacatcttgccaggccacatttagatttaagagagaactttggtagatcaggtatg
gataaccttggtaggagagaccattttgctttcaattcagataagcactggggacaaaga
ggggattatgatgaaagagagcaccatgcttttcctatatatggtggtcttaaaggcttc
ccggaagatcgagagaggtatcgacaaacaaactacagatttgaaagtcgaagtggtcct
agctggaacaggggccctgaacaggatacacacagagactttgatgaccgccgtagacct
tgggaaaggcagagggacagggatgatagagattttaattttggcagagaaattaatgga
aacagatatggaagagagagaatacagaacaactggataccccctccgcattcaagagta
tttgaatattttgaaggtggcacttctcaacaaaaagctgacagtgtaccccaggttaat
ggtgaaaatgcagagactgagggtcagccatctgctgtgcaagtacaggatgaatcggaa
ctttatgaaaagctgacaacttcaagtgacacaaaaaaagagaagagtgacacagaagct
gaattaggaagtgaaccagtggtagaaagcacagaaactgaggggacataa
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integrated database retrieval system
