Varanus komodoensis (Komodo dragon): 123019526
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Entry
123019526 CDS
T07701
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123019526 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vko03041
]
123019526 (DHX16)
Enzymes [BR:
vko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123019526 (DHX16)
Spliceosome [BR:
vko03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123019526 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
Flavi_DEAD
PWI
nSTAND3
Motif
Other DBs
NCBI-GeneID:
123019526
NCBI-ProteinID:
XP_044278395
Ensembl:
ENSVKKG00000004527
UniProt:
A0A8D2J3M1
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
MAGELERWVSEQLHTLLGLSERHVVAFMVGLARRSRAPEDLLARLEETETLRVTDPAARA
FAQQLWERVPHQAPRERPARAAEQEALALQQKNRSYTLLEDSDDDVPSEATAVRGSKRHH
PPRGPEGKQRKRHKHLRQRKEEEDDDDTDSDEKGKGKDGGWNSVVKEEDSEDEWDRSERE
RLQDLEERDAFAERVKRKDKDKTRNILERSDKKAYEEAQKRLKMAEEDKKFMVPELRKKS
RREYLAKREKDKIEDLEAEIADEEYLFSEMELTALERQELEYKRKVRDLAKQYKQAGEQE
KMEKSNRYYMPEESRSKKIPDRYEEPKTEDHLAPRDEQRRWEEDHIGAAALHFGARDAGQ
RHPHKDYEYVLEEDEMIQFVNAVQMRGTAQNKSQDEKPEMSEAERKKLSIQEVRHSLPIF
PYRADLLAAIAEHQTLIIEGETGSGKTTQIPQYLFEEGYTQKGMKIGCTQPRRVAAMSVA
ARVSQEMGVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLNSYSVIIIDEA
HERTLHTDILFGLIKDIARFRPELKVLIASATLDTERFSTFFDDAPIFRIPGRRFPVDIY
YTKAPEADYLEACVVSVLQIHVTQPQGDILVFLTGQEEIEACCEMLQDRCRRLGSKIAEL
LVLPIYANLPSDMQAKIFEPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNA
RTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAYKNEMEETTVPEIQRTNLGN
VVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRKMAELPVDP
MLSKMILASEQYKCSEQILTIAAMLSVNNAIFYRPKDKVVHADNARMNFFLPGGDHLVLL
NVYNQWVESGYSMQWCYENFIQFRSMRRARDVREQLEGLMERIEVDITSSEGDYIPVRKA
ITAGFFYHTARLTRSGYKSVKHQQTVFVHPNSSLFEEQPRWLIYHELVFTTKEFMRQVIE
IDSTWLLEVAPHYYKAKELEDASTKKLPKKVGKTREELG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagagctggagcgctgggtgtcggagcagctgcacaccctcctggggctaagc
gagcgccatgtggtcgccttcatggtgggcctggctcgtcgcagccgcgcgccggaggac
ttgctcgctcgcctggaggagaccgagaccctgcgcgtgacggaccctgccgcgcgagcc
ttcgcccagcagctgtgggagcgggttccacaccaggccccgcgggagcgtccagccagg
gcagctgagcaggaggcgttggctttgcagcagaaaaaccgttcctatacgctgctggaa
gatagtgatgatgatgtgcccagtgaagcaacagcagtccggggctccaagcgtcaccac
cccccacgaggccctgagggcaagcagcggaagcggcacaaacacctgaggcagcgcaag
gaagaagaagatgatgatgacacagactctgatgaaaagggcaaaggaaaagatggggga
tggaattcggtagtaaaggaagaagattcagaggatgaatgggatcggagtgagcgagag
cgcctgcaagacttggaggagcgtgatgcctttgctgaacgggtcaagcgcaaggacaag
gacaagacgcgcaacatcctggagcgttcagacaagaaggcttatgaagaagctcagaag
cgcctgaagatggcagaagaggacaagaaattcatggttccagaactgcgtaagaagtcc
cgccgagagtatttggccaaacgggaaaaggacaagattgaagacttagaggcagagatc
gcagatgaagagtatcttttctctgaaatggaactgacagcccttgagcggcaggagttg
gaatataaacgcaaagtgcgtgacttggcgaagcagtacaagcaggctggagagcaggag
aagatggagaagagcaatcgctactatatgcctgaggaaagtcgcagcaagaagatccct
gaccgctatgaggaacccaagacagaagaccacttggccccacgggatgagcagcggcgc
tgggaggaagaccacattggggctgctgccctccattttggtgcccgggatgctggtcag
cgccatccacacaaagactatgaatatgtccttgaggaggatgagatgatccagtttgtg
aatgctgtgcagatgcggggcacagctcagaacaagtcccaggatgaaaagccagagatg
tcagaagccgagcgcaagaagctgtccatccaggaagtgcgccatagcttgcccattttc
ccctaccgtgcagacttgctggctgccattgctgaacaccagacactcatcattgaaggg
gagactggctctggcaagaccactcagatccctcagtacttgtttgaagagggctacact
cagaaaggaatgaagattggctgcactcagcccaggcgagtggcagcaatgagtgttgct
gcccgtgtttcccaggaaatgggtgtcaagcttggaaatgaagtgggctatagcatccgt
tttgaggactgcacatctgagcgtacagtgctaaagtacatgacggatgggatgttactg
agagaattcctgacagaacctgacttaaacagctacagtgtcatcatcatagacgaagct
cacgagcgcacgctacacacagacatcctcttcgggctgatcaaggatattgctcgcttc
cggcctgagctgaaggtgctgattgccagtgccaccctggacacagagcgtttctccacc
ttctttgacgatgcgcccatcttccgcattcctgggcgccggttccctgtcgacatctac
tacaccaaggccccagaggctgattacctggaggcctgtgtcgtctcagtgctgcagatc
catgttactcagccccaaggggacatccttgttttcctcactggccaggaagaaattgaa
gcctgctgtgagatgctgcaggatcgctgccgtcgcctgggatccaaaattgctgaactt
ttggtccttccaatctatgctaacctgccctctgacatgcaggccaagatctttgagcca
accccaccaggggccaggaaggttgttgtggccacaaacattgcagagacatctttgaca
atagacggcatcatttatgtgattgaccctggcttttgcaagcagaagagctacaacgca
cgcacaggcatggagtcacttattgtcactccctgctctcgggcttctgccaaccagcga
gcagggcgggccggccgtgtggctgcagggaagtgcttccgtctgtacactgcctgggcc
tacaagaatgagatggaagaaaccacagtgccagagattcaaaggaccaacctgggcaat
gtggtactgcttctcaaaagcttaggcatcaatgacctaatccactttgacttcatggac
ccgcctccccatgagactctagttttggcattggagcagctctatgccctgggagccctc
aatcatcttggtgagctcaccaagctgggccggaagatggcagagctgcctgtggatccc
atgctatccaagatgatcctggcttcagaacagtacaaatgctcagagcagatcctcacc
atcgctgccatgctgtcagtcaacaatgccattttttaccggcccaaggacaaagtggtc
catgctgacaatgcccgcatgaactttttcctgcctggtggagaccaccttgttctcctc
aatgtttataatcagtgggtagaaagcggttattccatgcagtggtgctatgagaacttc
atccagttccgctccatgaggcgagcccgggatgtccgagaacagctagaagggctgatg
gagcgcattgaagtggacatcacttccagtgagggggactacatccccgtccgtaaggcc
atcacagctggctttttttatcacactgcccgcctaacccgcagtggttacaagagtgtc
aagcaccaacaaactgtattcgtccatcccaacagttccctttttgaagagcaaccacgt
tggctcatctatcatgaattggtcttcaccactaaagaattcatgagacaggttatagaa
atcgacagcacatggttgctggaggtggcccctcactactacaaggccaaggagctggaa
gatgcctctacgaagaagctgcccaagaaagtggggaagacacgggaggaactgggataa
DBGET
integrated database retrieval system
