Varanus komodoensis (Komodo dragon): 123019711
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Entry
123019711 CDS
T07701
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vko04147
]
123019711 (COL18A1)
00535 Proteoglycans [BR:
vko00535
]
123019711 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
vko00536
]
123019711 (COL18A1)
Exosome [BR:
vko04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123019711 (COL18A1)
Proteoglycans [BR:
vko00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
123019711 (COL18A1)
Glycosaminoglycan binding proteins [BR:
vko00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123019711 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Fz
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
123019711
NCBI-ProteinID:
XP_044278649
LinkDB
All DBs
Position
Unknown
AA seq
1868 aa
AA seq
DB search
MARTELSAGLLLLLTCCSANAQGWRSWWTWGNLEKTTFPPTEAARTEEQTALHPGTPEET
TPLNVPVESTTEQKGSVWTVLTPGRPDLTAATTTPPAASLSQLEGTEGNITGAGAEILST
TEGSGNLLQFGDEKATEGAKTEEAPVAADPVTALPLPVTEPVSIQNTTANSTGDVQTSAE
TGQPELALAVTTKQAVLWNETRVLLKKPEIPLPGSASFSFSPNGRDDSGTTLAFQESTDA
GQEGAASPETRAAWGVLSDSRGTPSHGNALEMQAPRAPSSSMRAGIPSKVVGALDNGLLR
SVLNSYPSVSHGNGAHKNHTSLRPAGMVVTDANKNRSRDFVVSNSSTTNFMDFPPANNSD
SLELLLTYAMQDFSNSSVGLASFFPGLTPAAGHCLPLPGKLSYCNHLGMKHFRVPNYLHH
GSEEEVWAALHEWEGLLKSRCHRYLEWFFCLLLVPGCNASLPIAPPPCRGFCEALKDLCW
TQLKTGHLPISCDSLPAEDGAYACVFVNVSAENFSTEVGLLELIGDPPPEQITKVYGPDN
SPGYVFGLDANTGQVARYHLPSPFYRDFSLLFHVQPTRDKAGVLFAITDASQSIIYVGVK
LSEVKDGKQQIIFYYTEPGSQNSYAAATFVVPSLVDRWTRFAISVEEEEVILYMDCEEYE
RVRFERSPDEMELEDGSGLFVAQAGGADPDKYQGVIAELKVKGDPQAAEVQCEEEEDDSD
IISGDGGSGAEEKPRLPERERVTSTISSLPLPPPPTSPPTVKKPAQPEEKLTLETELTKL
EAGTPFASGVGAKGQKGDPGEKGERGSKGDSGVGGVLSTNGAKGEKGEKGELGIKGSAGF
GYPGSKGQKGEPGDQGPPGPTGPPGSPGTIVKHPNGSVVEHVAGLPGPVGPPGPPGKDGL
PGKDGEPGDPGEDGKPGDVGPQGFPGTPGEPGLKGEKGDQGIGVRGPPGPPGPPGLPGVG
SKLDKLTFIDMEGSGFGGDLETLRGPRGPPGPPGPPGVPGLPGQPGRFGTNSTDLPGPPG
LPGVPGRDGIPGLPGPPGPPGPPGKEGIAGQPGLKGTTGEPGELGLPGAPGPKGSKGDAG
VPGAPGEPGLAGLPGPMGPRGQPGPPGPGFMAGFDDMEGSGLPFVSGVPGVRGPEGPQGP
PGLPGLKGDAGSVGLPGLPGMKGDPGLPGLDGRPGLEGFPGPQGPKGDTGDPGVKGERGQ
DGIGLPGPPGPPGPPGEVIYQSSDDKKLSLFPGPEGKQGHAGFPGPVGPKGDTGIAGVQG
PPGLKGEKGEPGVIIGPDGTDLAANTKGEKGEPGLQGPMGPPGLPGRHGQKGEIGFPGRP
GRPGMNGLKGEKGDPADSGGNLGLRGPPGLPGPPGPPGPPGSVVPVYDNNAFGDMGPPGP
PGLPGYHGTPGEKGEKGEMGPPGPPGQFPYDFSRFGSTFRGEKGDKGETGTKGEKGESGG
GSFGSGIVGPPGPPGYPGLPGSKGDSIRGPPGPPGPQGPPGAGYEGRPGIPGPPGPPGPP
GPPSFPGAHRQSIGIPGPPGPPGPPGPPGVSDRSPSSGLRILPTYQSMIGRAHEVPEGQL
VFIPEREELYIRVRSGFKKILLEEKVSLSGPGLDNEVHERFSSVHYSHGGTAASGSPRFV
QPHLPVHSHREYSTYSTARPWRGDDSIASQHRLPEQPRQGAQRHQESLNSLLLNGRQPEA
APSAHTHHDFQPALHLIALNAPLSGSMRGIRGADFQCFQQAREVGLTGTFRAFLSSRLQD
LYSIVRRADRSTVPIVNLRDEVLFNNWENLFSGSEASFRTGAHILSFDGRDVLRDSAWPQ
KYVWHGSDSKGRRLTESYCETWRTDDAVVAGQASSLASGKLLEQKSSSCKNAFIVLCIEN
SFMTSSQK
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atggctcggactgagctctctgcggggcttttgctgttgctgacctgttgctcagccaat
gcacagggctggaggagttggtggacttgggggaacctggagaaaacaacctttcctccc
accgaagctgccaggactgaggagcagaccgcactgcatcctggcacgcctgaagagacc
acccccctgaatgtgcccgttgagagcaccaccgagcagaagggaagcgtgtggactgtc
ttgacccccgggagaccagacttgactgctgccacgaccacccctccagcagcatccctt
tcccagctggaaggcacagaaggaaacattacaggggcaggggcagagatactcagcaca
actgaaggaagcgggaatttgcttcagttcggggatgagaaggcaactgaaggagcaaag
acggaagaagcacctgtggctgcagatcctgtgacagcactgcccctccctgttacggag
cccgtgagcatccagaacaccactgccaactccacaggtgatgtgcagacctcagcggaa
actgggcagcctgaactggctctcgcggtgactacaaagcaggctgttctgtggaatgag
acccgagtcctcctaaagaagcctgagattcccctcccaggtagcgcttctttctcgttt
tcaccaaatggtcgtgatgacagtggcaccacgctggcattccaagaatcgacagatgcg
gggcaggaaggtgctgccagcccagagacaagggcagcctggggagtgctctcagacagc
cgaggaaccccgtcccatgggaatgctttggagatgcaggcgcctcgggcacctagcagc
agcatgcgtgctggaattccatccaaggtggtgggtgctttagacaacgggcttctccgc
tctgtactaaattcatacccatcagtctctcatggcaatggagcccataaaaaccacacc
tcccttaggcctgctgggatggtggtaaccgatgcaaataagaatcgctctagggatttc
gttgtttctaattcgagcacaactaattttatggattttccccctgccaataactctgac
tctcttgagttgctactaacctacgctatgcaagattttagcaatagtagtgtggggctt
gcttccttctttcctggactgactccagcagctggccactgcttgcccttaccaggcaag
ctgtcatattgcaaccacctgggcatgaagcatttccgagtgccgaattatttgcatcat
ggcagtgaggaggaagtttgggctgctttgcatgagtgggaggggcttcttaaatctcgg
tgtcaccgctacttggagtggtttttctgcttgctactggtacctgggtgcaatgcttct
cttccaatcgcacctccaccgtgccggggattttgtgaggccctgaaagatctgtgttgg
actcaactgaaaacagggcaccttccaatatcatgcgactctctcccagcagaggatggt
gcatatgcatgtgtatttgttaatgtttcagcagagaatttcagcacagaagttggcctc
ttagagctgattggggatcctccaccggaacagataaccaaagtgtacggcccagacaac
agccctggctatgtgtttggactggacgccaacacgggacaagtggcacgttaccaccta
cccagccctttctacagagacttctcactcttgttccatgtgcagcccactagagacaaa
gcaggagtgctgtttgccatcacagatgcctcccagtccatcatctacgttggggtgaag
ctatccgaggtaaaagatgggaaacagcagatcatcttctactacacagagccgggctcc
cagaactcctatgctgctgccacgttcgtcgtgccctctctcgttgatcggtggactcgc
tttgccatcagtgtggaagaggaagaggtcattttatacatggactgtgaggagtatgag
cgggtccgttttgagcgctcgcctgatgaaatggagctggaagatggttctgggcttttt
gtggcacaagcgggaggagctgatcctgataaataccagggtgtaattgcagaattgaaa
gtgaaaggagaccctcaggcagctgaagtccagtgcgaagaagaagaggatgattctgat
ataatatctggggatggaggaagtggagctgaagaaaagccccggctaccagaaagggaa
agggtgacttcaacgatctcaagtctaccattacctccaccccccacttctccccccact
gtcaaaaagcctgcgcagccagaggagaaacttactttggaaactgaacttaccaagttg
gaagcagggacgccatttgcttcaggggttggagccaaaggtcaaaagggcgaccctggt
gaaaaaggggaacgtggctctaaaggagactctggagttggtggagttttgtcaacaaac
ggtgcaaaaggtgaaaagggcgaaaaaggagaactgggcattaagggaagtgctggcttt
ggatacccaggctctaaaggacagaaaggcgagcctggcgatcaggggcctcctggcccc
acaggcccgcctggctcgcccggcaccattgtcaagcaccccaatggctctgtggtagag
catgtcgcagggcttccgggacctgtgggcccaccaggaccgcccgggaaggatggcttg
cctgggaaggatggagaacctggagatcctggtgaagatgggaaaccaggtgatgttggc
ccccaaggattccctggaacccccggggagcctggattaaaaggtgaaaagggagatcaa
ggcattggtgtgagaggtccacctgggccacctgggccaccaggtctaccaggagtcggc
tctaaattggacaagttgacatttattgacatggaaggctctggttttggaggtgatttg
gaaaccctgcgaggcccccgaggaccacctgggcccccaggccctcctggcgtgcccggc
ttgccaggacaacctggaagatttgggacgaatagtactgaccttccagggccgcctggc
ctccctggagtgcccggcagggatggtatcccaggacttccaggacctcctggccctcct
ggtcctccaggaaaagaagggatcgctggccagcctgggctgaagggcacaactggagaa
ccaggcgaattaggcctcccaggagcacctggacctaagggcagcaagggagatgcaggg
gtgccaggagcaccaggggaacctggcctggcaggcctgcctgggcccatgggtccccgt
ggacagcctgggcctccagggccaggcttcatggctggatttgatgatatggagggctca
ggactgccattcgtttctggtgtccctggggtacgtggaccagaagggccacagggcccc
cctggacttccaggactcaagggagatgcgggcagcgttggtcttccaggtttgccagga
atgaagggagaccctggacttccagggctggatggtcgccctgggctagagggattccca
ggaccacaagggccaaagggtgatacaggagatccaggggttaagggtgaacgaggacaa
gatgggataggactgccaggtcctcctggccccccaggccccccaggagaagtcatctac
cagtcaagtgatgataaaaaattatctctttttccgggcccagagggcaaacaagggcat
gctggcttcccagggccagtgggaccaaaaggggacacaggaatcgcaggtgttcaaggc
cctccaggactgaagggtgaaaagggagagccgggagttatcattggccctgatggaacg
gacctagcagctaatacaaaaggagaaaagggtgaaccaggcttacaaggacctatggga
ccaccagggctacctggacggcatggacaaaaaggagaaattggattccctggaagacca
ggtcgccctggtatgaatggcctgaagggagaaaaaggtgacccagcggactcaggtgga
aatctgggcttaaggggtcctcctggcctcccaggccctcctggccccccaggtcctccg
ggcagcgtagtgcctgtttatgacaataatgcatttggcgacatgggccctcctggacca
ccaggattgcctggctaccatggtactcctggtgagaagggagagaaaggcgagatgggt
cctccagggcccccaggccagttcccctatgacttcagcagatttggctccaccttcagg
ggcgaaaaaggggacaaaggtgaaacagggacaaaaggcgagaaaggagagtcaggtgga
ggatcatttggatcaggcatcgttggacctccaggtcccccagggtaccctggtcttccg
ggctctaaaggagacagtattaggggtccacctggccctccaggaccccaaggacctcct
ggggcaggatatgagggacgccccgggatccccggcccccctggtccacctggccctcca
ggaccaccttcttttccaggagcccataggcaatccattgggattcctgggccaccaggg
ccaccggggccaccagggccaccaggcgttagtgatagatctccctcttccgggctgcgg
atcttgccaacctaccagagcatgataggcagagctcatgaagtgcccgaagggcagctt
gttttcatccctgagagagaagagctctacatccgcgtccgcagtggtttcaagaagatt
ctcctcgaggaaaaagtgagcctctctggccctgggctggacaacgaggtgcatgaaagg
ttttccagcgtccactactcgcatggcggcacggcggcctcgggatccccacgcttcgtc
cagccgcatttgcctgtgcattcgcaccgagaatacagcacttactccactgccaggccc
tggagaggggacgacagcatcgccagccagcaccgcctccccgagcagccccgccaggga
gcacagcgccaccaggagtccctgaacagcctgctgcttaacggccgccagcccgaggcg
gctccctctgctcacacgcaccacgatttccagcctgctctgcacctgatagctctgaac
gctcccctgagcggcagcatgcgtggcatccgaggagcggacttccagtgcttccagcaa
gcccgggaggttggcctgacaggcaccttccgagctttcctctcctcccggctgcaggac
ctctacagcatcgtgcgcagagcggacaggagcaccgtgccgatcgtcaatctcagggat
gaagtgctctttaataattgggagaacctcttctcaggctctgaggcatcatttagaact
ggggctcacatcctctccttcgatggaagggacgttctgagagactcggcatggcctcag
aagtacgtgtggcacggctccgattccaaaggacggcggctaacagagagctattgtgaa
acatggcggacagacgatgctgtggtggcaggccaggcctcttcactggcatcaggcaag
ctccttgagcagaagagcagcagctgcaagaatgccttcatagtcctgtgcatcgaaaac
agcttcatgacttcttcccaaaaataa
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integrated database retrieval system
