Varanus komodoensis (Komodo dragon): 123019892
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Entry
123019892 CDS
T07701
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vko04121
]
123019892 (PDZRN4)
Enzymes [BR:
vko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123019892 (PDZRN4)
Ubiquitin system [BR:
vko04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
123019892 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
123019892
NCBI-ProteinID:
XP_044278991
Ensembl:
ENSVKKG00000003527
UniProt:
A0A8D2J5R5
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MGCNLCSFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRAPLLK
THGSSQDIRLMDASTQTDITFEHIMALAKLRPTTPPVPDICPFLLSDSCHSLHPIEHEFY
DGNEYLSSLPADADRTEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYISEVDPNS
IAARDGRIREGDRILQINGQDVQNREEAVALLSSDECKKIVLLVARPEMQLEEGWLDDER
NAFLEELNLEMLEEQHNEAVQYTGNEVEQPKKHEEEDGTTDTATSSSNNNEKDSGVGPTD
ESQRNDESSEQENPPEEKNNAALQSQRELGQSQETLGSMEIQCNKSLVSGEPAQSDFVGN
QEEDCERFRQLLELKCKIRNHGEYDLYYSSSTIECNRRQKDGVEHELQLLNEELRNIELE
CQSIMQAHRLQKVKDQYGDIWALHGGTFRNYNTSIDLPGGKLDDIMEHPEKSDKDSSSAY
NTAESCRSTPLNVGQSPDSSLQRMISITNRKNLRSTIVASQLSSRQSGRETSPNKAKATE
QNSSVEEKETVSESGKSTEQEKQSPEHIPYLSPYHSSSYRFGSIPAHAKHYQSYMQLIQQ
KSAVEYAQSQLSLVNMCKDSQKCTEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIK
EERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSSG
EGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDDTRVHNAFLSVTTV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggttgcaatctgtgcagttttcaaaagagggaggaacactacaaactgctctatgaa
gtttctcaggtcaacgggaaggatctctccaaagccacgcatgaagaagcagtggaggct
tttcgcaatgctaaagagcccatagtggtccaggttctccggagagcacctcttctcaaa
acacatgggagctcacaggacattcggctcatggatgccagcacacagacagatattaca
tttgagcacattatggctctggccaagctaaggccaaccacacctccagtacctgacatc
tgccccttcctgctttctgacagctgccattctcttcatcctattgagcatgaattttat
gatggtaatgaatatctttccagcctgcctgctgatgctgacagaactgaggactttgag
tatgaggaagttgaactttgtcgtgttagcagccaggaaaagttggggttgacagtctgt
taccgcacagatgatgaggaggacacagggatctatatcagtgaggttgatccaaacagt
attgctgctcgagatggacggattcgggaaggagatcggattttgcagataaatggccaa
gatgtccaaaaccgggaggaggcagtggcgttactctccagtgatgaatgcaagaaaatt
gtattgctggtagccagaccagagatgcagctggaagaaggatggctggatgatgaaagg
aatgcattcttggaggagttaaacctggaaatgttggaagaacagcataatgaggcagtg
cagtacacaggcaatgaagtggagcagccaaagaaacatgaagaagaagacggcaccaca
gatactgctacctcatcatccaacaacaatgagaaagacagtggagtgggccccacggat
gagagccagcgcaatgatgagagctcggagcaagaaaatccaccagaggagaagaacaat
gcagctctgcagagccaacgggaacttggacagagccaggaaactttgggaagcatggaa
atccagtgcaacaagagtctggtgtctggggaaccggctcagtctgattttgttggtaat
caggaagaggactgtgaaaggtttcgccaactcctggagctcaagtgcaagatccgaaat
catggagagtacgacttgtactattcaagcagtacaatagaatgtaacagaaggcaaaaa
gatggggttgagcatgaacttcagctgctcaatgaggaactgaggaacattgaacttgag
tgtcaaagcattatgcaggctcaccggctacaaaaagtaaaggatcagtatggagacatt
tgggcactccatggtggtacattcaggaattataacaccagtatagaccttccaggagga
aaactggatgacataatggagcatccagagaaatctgacaaagatagttccagtgcctac
aataccgcagagagctgtcgaagcactccgctgaatgtcggacaatctcctgacagttct
ctccagcgaatgataagtatcaccaataggaaaaacctcaggagtaccattgtggccagc
cagctgtcttcaagacagagtggcagagagacctccccaaacaaagccaaagctactgaa
cagaacagttctgtcgaggaaaaggaaacggtttcagaaagcggcaagtctacagaacaa
gaaaagcaaagccctgagcatattccttatctgtctccgtatcacagttcttcataccgg
tttgggagtatacctgcacatgctaagcattatcaaagctatatgcaactgatacaacaa
aaatctgctgtggagtatgcccagagccaactcagcctggtgaacatgtgcaaagattca
cagaagtgcacagaacccaagatggaatggaaagtgaaaataaggagtgatgggacacgg
tatatcacaaaaagaccagtaagagacagaatcctgaaggaacgtgccttaaagattaag
gaggagcgcagtgggatgacaacagatgatgacacaatgagcgaaatgaagatgggtcgt
tactggagcaaagaggagcggaagcaacacttggtgcgagccaaggaacagaggaggagg
cgggaattcatgatgcgcagcaggttagagtgtcttaaagaaagcccacaaagcagcggt
gagggcaaaaaggaaattaacatcattgaactgagtcataaaaagatgatgaaaaagagg
aacaagaagatcttggacaactggatgactatccaggaacttatgacgcacggtgctaaa
tctccagatgacacaagagtgcacaatgcttttttatcagttactacggtatga
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