Varanus komodoensis (Komodo dragon): 123019976
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Entry
123019976 CDS
T07701
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03013
Nucleocytoplasmic transport
vko03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123019976 (UPF2)
03015 mRNA surveillance pathway
123019976 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123019976 (UPF2)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123019976 (UPF2)
mRNA cycle factors
P-body specific factors
123019976 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
123019976
NCBI-ProteinID:
XP_044279200
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MPAERKKSTSMEEKETSLNNKDKEFSDRRSVNSRDKPKEDVRLGMKREMLKPPEDKKKKL
EEEKRKKEDKERKKKDDEKVKCEEEQKKKEEEEKQKFEEEEKKKQEEEVKRQQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNASDSRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKGAADKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPVPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKYSQNKDSNKDDSRELKEAKENKDVSGTDDLELDLENLDINDDTLELDCGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
RKLVRALFIVPRQRLDLLPFYARLVGTLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIE
TKNKTVRFIGELAKFKMFSKSDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYHCNPPPAEKTVKKKRPPLQEYIRKLLYK
DLSKVTTEKVLRQMRKLPWHDPEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSRYVWWKKSLDVWTKDHPFPIDIDYMISDTL
ELLRPKIKLCNSLEESVRQVQELEREILIKLGLVNDKDSKDSLTEGENLEEEEEEEEGGV
EIGEQSGNESEINEPEEEEGSDNDDEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGG
GLKRVPCAEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGGGE
GESESGDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDIN
ERQEQEDYQEMMQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGRRERGNRQRRS
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaagaagtcaacaagcatggaagaaaaggaaacatcattaaataac
aaagataaggagttcagtgacaggcggtcagtgaacagccgggacaaacccaaagaggat
gtcagacttggcatgaaaagagagatgttaaaaccacctgaagataaaaagaaaaaattg
gaggaggagaaacggaaaaaagaagacaaggagcggaagaaaaaagacgacgagaaggta
aaatgtgaagaggagcaaaagaaaaaagaagaggaagaaaagcaaaaatttgaagaggaa
gagaaaaagaagcaagaggaagaagtaaagcggcagcaagaagaggcagctgctcagttg
aaagaaaaagaggaagcacatcagctccaccaggaagcttgggagcgccaccaagcaaga
aaagaacttcgaagcaaaaaccagaatgcatcagatagccgccctgaagagaacttcttt
agcaggctagattcaagcctcaaaaagaacactgcctttgttaagaagttaaaaactatc
acagaacagcagagagactccttgtcccatgattttaatggcctcaatttaagcaagtac
attgcagaggctgttgcttctatagtagaagcaaaactgaaaatatcagatgtaaactgt
gctgtgcatttgtgttctctgttccatcagcgttatgctgactttgcaccatccctactt
caagtctggaagaagcattttgaagcaaggaaagaagaaaaaacacccaacattactaaa
ctaagaacagatttgcggttcattgcagaactgacaatagttgggattttcactgataag
gaaggcttgtctttaatctatgaacagctgaaaaatattattaatgctgatcgtgaatcc
cacacccatgtttctgtggttattagcttttgccggcattgtggagatgacattgctggt
ttggtaccaaggaaggttaaaggtgcagcagataaatttaacttgagttttcctcccagt
gaaataattagcccagagaagcaacaacctttccaaaacctgctgaaggaatattttaca
tctttgaccaaacacctgaaaagggaccacagggaactacaaaatattgaaagacaaaac
aggcgtattctgcattctaaaggggaattgagtgaagatcggcataagcagtatgaagaa
tttgctatgtcctatcagaagttgttggctaactctcagtcattagctgatctcttggat
gaaaatatgcctgatctcccgcaagataaaccagtaccagaagaacatgggcctggcatt
gatatctttacccctggcaagcctggtgaatatgatttggaggggggtatctgggaggat
gaagatgcacggaacttctatgagaaccttattgatttaaaagcatttgtgcctgctatc
ttattcaaggataatgaaaaatattcccagaacaaggactctaataaagatgattctaga
gaattaaaagaggctaaggaaaacaaagatgtgtcaggtactgacgatttggagttggac
ctggagaatctggatattaatgatgatacccttgagttagactgtggtgatgaagctgaa
gatcttacaaaaaagcttcttgatgaacaagaacaagaagatgaagaagccagtactggg
tcacacctaaagcttatagtagatgctttccttcagcagctcccaaactgtgtaaataga
gacttaatagacaaggctgccatggatttttgcatgaatatgaacacaaaagccaataga
aggaagttggttcgtgcgctctttatagttcctcggcaaaggctggatttgctgcccttt
tatgcaaggctggttggcacattgcacccttgtatgtctgatgtagcagaagatctctgt
tccatgttgaaaggcgacttcagatttcatgtaaggaagaaggatcagattaacattgaa
acaaagaacaaaactgttcggtttattggtgagcttgcgaagttcaaaatgttctccaaa
agtgacactctgcattgcttaaagatgcttttgtctgatttttctcatcaccatattgaa
atggcatgtactttattggagacttgtggtagattcctcttcagatcaccagaatcccat
ttaagaaccagtgtccttttggaacaaatgatgcgaaagaaacaagcaatgcatcttgat
gcacgctatgtcacaatggtagaaaatgcctattaccactgcaaccctcctccagcagaa
aagactgtaaaaaagaaacgtcctcctctccaggaatatattcggaaactcctgtataag
gatctctccaaagtcactactgagaaggtcctgagacagatgcgcaaattgccgtggcat
gaccctgaagtgaaagactatgttatatgttgtatgatcaacatttggaatgtgaaatat
aatagtattcactgtgtagccaaccttttagcggggctggtactttatcaagaggatgtt
ggaattcatgttgtggatggtgttctagaggatattcgactaggaatggaggttaatcag
ccaaaattcaaccaacggaggattagcagtaggtatgtctggtggaagaagagcctggat
gtttggacaaaagatcacccgttccctatagacattgattatatgatcagtgatacatta
gaactgctgagaccaaagataaaactctgcaattctctggaagaatctgttaggcaggta
caagaactggaaagggaaatcttaatcaaattaggacttgtgaatgacaaggattctaaa
gattcacttactgaaggagagaacctggaggaggaggaggaggaagaggaaggtggagta
gagataggagaacaatctggaaatgaaagtgaaataaatgagccagaggaggaggagggc
tccgacaatgatgatgaagagggagaagaagaagaagaagaaaatacggattatctcaca
gactctaataaggagaatgaaactgatgaagagaatactgaagtaatgattaaaggaggt
ggactgaaacgtgtcccgtgcgctgaagatgaagacttcattcaggcattggacaaaatg
atgctggaaaatttgcagcaaaggagtggcgagtctgtgaaagtgcatcagctagatgtt
gcaattcccttgcatctcaagagccagctcaagaagggtccaccactaggtggtggggaa
ggagaatctgaatctggagacacaatgccttttgtcatgttaactcgaaaaggcaacaag
cagcagtttaagatcttaaatgtaccgatgtcttcccaactggctgcaaatcactggaat
cagcaacaagctgagcaagaggagagaatgagaatgaaaaaactgacattggatatcaat
gaacggcaagaacaagaggattatcaggaaatgatgcagtccctggctcagcggccagct
ccagcaaataccaaccgagaacggcggcctcgttatcagcatccaaagggagcacctaat
gctgatctaatctttaaaactggtggaaggcgtgagagagggaacagacagcgtcgaagc
tga
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integrated database retrieval system
