Varanus komodoensis (Komodo dragon): 123020230
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Entry
123020230 CDS
T07701
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123020230 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123020230 (DDX6)
03036 Chromosome and associated proteins [BR:
vko03036
]
123020230 (DDX6)
Enzymes [BR:
vko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123020230 (DDX6)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123020230 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
123020230 (DDX6)
Chromosome and associated proteins [BR:
vko03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123020230 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
123020230
NCBI-ProteinID:
XP_044279604
Ensembl:
ENSVKKG00000009179
UniProt:
A0A8D2JL39
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPTGGPGGGGTQAQQQINQLKHPNTINNGTQQQAQ
SMASTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVDD
EKP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagccagaacagagaaccctgttataatgggtctctccagtcaaaatggacaa
cttaggggcccagtgaaacccacaggtggcccaggaggcgggggaacacaggctcagcaa
cagataaaccagctgaaacatcccaacacaatcaacaatggcactcagcagcaagcacag
agcatggcctccactatcaagcctggcgacgactggaagaagactttaaaactccctcca
aaagatctgagaatcaaaacttcggatgtgacgtccacgaaaggaaatgaatttgaagat
tactgtctgaaacgggagttgctgatgggaatttttgaaatgggctgggaaaaaccatct
cctattcaggaggagagcattcctattgctttgtctgggagggatatcttggccagagct
aagaatggaaccggtaagagcggcgcctacctcattcccttacttgaacggcttgactta
aagaaggataacatacaagcaatggtgattgttcccacacgagaacttgccctgcaggtc
agtcagatctgcatccaggtcagcaaacatatgggaggggccaaagtgatggcaaccact
ggaggaaccaacctgcgcgatgacataatgaggctggacgatacagtgcacgtggtgata
gctacaccagggaggattctggatctcatcaagaaaggagttgccaaggtggaccatgtc
cagatgattgttctagatgaggcagacaagttgctgtcccaagattttgttcaaataatg
gaagacattattctcacgctacctaaaaacaggcagatcttgctatactcagccacgttc
cctctaagtgtacagaagtttatgaactcccacttgcagaaaccatatgagattaacttg
atggaggagctgacactgaagggagttacccagtactacgcttatgtaactgagcgccag
aaagtgcattgtctcaacacactcttctccaggcttcaaattaatcaatcaatcatcttc
tgcaactcctcccaacgggttgaactgctagctaagaaaatctcccagctggggtattcg
tgcttctacattcatgccaagatgagacaggaacaccgcaatcgagtgttccatgatttc
cggaatggtttatgccgcaatcttgtttgcactgatctgtttacccgaggtattgatatc
caagctgtgaatgttgtgataaactttgattttccaaagctggcagagacgtatctccac
cgtattggcagatcaggtcgattcggccatctcggcctcgccatcaacttgatcacctat
gatgatcgattcaacctgaaaagtattgaagagcagctgggtacagaaatcaagcccatc
cccagtaacattgacaagagcctgtatgtggcagaataccacagcgagcctgtagatgat
gagaaaccataa
DBGET
integrated database retrieval system
