KEGG   Varanus komodoensis (Komodo dragon): 123021120
Entry
123021120         CDS       T07701                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
vko  Varanus komodoensis (Komodo dragon)
Pathway
vko03420  Nucleotide excision repair
vko04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:vko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123021120 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    123021120 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vko04121]
    123021120 (DDB1)
   03400 DNA repair and recombination proteins [BR:vko03400]
    123021120 (DDB1)
Ubiquitin system [BR:vko04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     123021120 (DDB1)
DNA repair and recombination proteins [BR:vko03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123021120 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      123021120 (DDB1)
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 123021120
NCBI-ProteinID: XP_044281488
Ensembl: ENSVKKG00000003908
UniProt: A0A8D2ISR4
LinkDB
Position
Unknown
AA seq 1140 aa
MSCNYVVTAQKPTAVNSCVTGHFTSSEDLNLLIAKNTRLEIYAVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLERENKELKAFNIRLEELQVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGGVSLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHRE
TDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSGSVRLVT
QEPKALVSEWREPNGKNISVASCNSSQVVVAVGRVLYYLEIHPQELKQISCTEMEHEVAC
LDITPLGDIGGMSPLCAIGLWTDISARILKLPSFDLLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNVETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTASHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLPTEYALSLVSCKLGKDPNTYFIVGTAMVYPDE
AEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYVKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEFGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDVQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtgcaactacgtagtgacggcacagaagcccacggccgtcaatagctgcgtcacc
gggcatttcacctcctcggaggacctgaacttgttgattgccaagaacacccgcttggag
atctatgcggtcaccgccgaagggctgcggcccgtcaaggaggtgggcatgtatggcaag
atcgcggtcatggagctcttccggcccaagggggagagcaaggatttactttttattctg
actgcaaaatataatgcctgcatccttgaatacaaacaaagtggagaaagcattgatatt
atcacccgagcccatggcaatgtgcaggatcgtattggtcgtccctcagaaactggtata
attggcataattgacccagagtgccgaatgattggactaagactctatgatggcctcttc
aaagtgattcctctggaacgggaaaataaggaattaaaggcatttaatatccgactggag
gagctacaggtcattgatgtcaagttcctgtacgggtgccaggccccaaccatctgtttt
gtttaccaggatccgcagggccggcatgtcaagacatatgaagtgtctttacgtgagaag
gagtttaacaaaggaccctggaaacaggagaatgttgaggctgaagcctctatggtgatt
gcagtgcctgagccatttggaggggctatcattattggacaagaatccatcacctaccac
aatggtgataaatacctggctatagctccgcctatcatcaagcaaagtacgattgtgtgt
cacaatcgtgtggacccaaacggttcccgttaccttctgggggacatggagggccgccta
ttcatgctgttattggagaaggaggagcagatggatggtggtgtcagtctgaaggatctg
cgcgtggagctgcttggagagacatccattgcagaatgcctgacttacctagacaatggt
gttgtgtttgttggctcacggcttggggactcccagcttgtaaagctcaatgtggacagt
aatgagcaaggctcatatgttgtggccatggaaaccttcaccaaccttggtcccattgtg
gacatgtgcgtggtagaccttgagagacaaggccaagggcagctggttacatgttctggt
gcctttaaggaaggctctttgaggatcatccggaatggaattggaattcacgaacacgcc
agcattgatcttccaggaattaaaggattatggcctttgagatcagactctcaccgtgaa
actgataacaccttagtattgtcctttgtgggacaaactagggttttgatgctgaatggg
gaagaagtagaggaaactgaattgacaggatttgttgatgatcagcaaacatttttctgt
gggaatgtggcccatcaacagctaatccagataacatctggttcagtacgacttgttact
caggagcccaaggcccttgtaagtgaatggagagagccaaacgggaagaacatcagcgtg
gcttcctgcaacagcagtcaagtggtggtggccgtggggagagtgctgtactacctagag
attcaccctcaggaactgaagcagataagttgcacagagatggagcatgaggtggcctgc
ctggatatcaccccgctgggagacatcggcggcatgtcccctctgtgtgccattggcctt
tggactgacatctcagctcgcattctgaaactgccctcattcgacctgctgcacaaggag
atgctgggaggagagatcatcccacgttccatcctgatgaccacctttgagagtagccat
tatctgctttgtgccctgggggatggggctctcttttacttcgggctgaacgttgagaca
ggtttgctgagtgaccggaagaaagtgactctgggaacccagcccactgttttaaggacc
tttcgctccctctccaccaccaacgtatttgcctgctctgaccgcccaactgtgatttac
agcagcaaccacaaactggtcttttccaacgtcaaccttaaggaggtgaactacatgtgc
cctctcaactcagatggctatcctgacagcctggctttagccaacaacagcacattgacc
attggcaccatcgatgaaattcagaagctgcacatccgcactgttcccctttacgagtca
cccaggaagatctgctatcaggaagtatctcagtgttttggtgtgctgtccagtcgcatt
gaagtccaggatgccagtggaggcacaacagctctgaggcccagtgcaagcacccaggcc
ctttccagcagcgtgagctctagtaaattgttctccagcagcacagcctcccacgagaca
tcctttggggaggaggtggaggtgcacaacctgcttatcatagatcaacacacatttgaa
gtgcttcatgctcaccagttcctacccactgagtatgcgctcagcctggtctcctgcaaa
ttgggcaaagaccccaacacgtattttattgtgggcacagccatggtatatcctgatgag
gctgaaccaaaacagggccgtattgtggtgttccactattctgatggtaaattgcagagt
ctggctgagaaagaagtgaaaggggctgtctattccatggtggaattcaatggaaaactc
ttagccagcataaacagcacggtgcggctgtacgagtggacagcggagaaggagctgcgc
acggagtgcaatcattacaacaacatcatggcgctctacgttaagacaaagggtgacttc
atcttagttggcgatctgatgcgctctgttctgttgctcgcctataagcccatggagggg
aactttgaagagattgctcgtgactttaatccaaattggatgagtgcagtggagattttg
gatgatgacaacttccttggggcagaaaatgcctttaacttgtttgtatgccagaaggac
agtgctgccaccactgatgaggagcgccagcatctgcaggagtttggactgtttcatttg
ggcgagtttgtcaatgtcttctgtcacgggtcccttgtcatgcagaacctgggcgaaaca
tccaccccaacgcagggctccgttctctttggcacagtcaatggaatgatcgggctggtg
acttcgctgtcagaaagttggtataatctcctgctggatgtgcagaacaggctgaacaaa
gtcattaagagtgtaggcaagatcgaacactctttctggagatcatttcatacagaacgc
aagacagagccagctacaggatttattgatggagatctaattgaaagctttctggacatc
agccgacccaagatgcaagaggtggtggctaacctacagattgatgatggcagtggcatg
aagcgggaggccacagtggatgacttgatcaagattgtggaggagctcacccgtatccac
tag

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