Varanus komodoensis (Komodo dragon): 123021120
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Entry
123021120 CDS
T07701
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03420
Nucleotide excision repair
vko04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123021120 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
123021120 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vko04121
]
123021120 (DDB1)
03400 DNA repair and recombination proteins [BR:
vko03400
]
123021120 (DDB1)
Ubiquitin system [BR:
vko04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
123021120 (DDB1)
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
123021120 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
123021120 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
123021120
NCBI-ProteinID:
XP_044281488
Ensembl:
ENSVKKG00000003908
UniProt:
A0A8D2ISR4
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MSCNYVVTAQKPTAVNSCVTGHFTSSEDLNLLIAKNTRLEIYAVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLERENKELKAFNIRLEELQVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGGVSLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHRE
TDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSGSVRLVT
QEPKALVSEWREPNGKNISVASCNSSQVVVAVGRVLYYLEIHPQELKQISCTEMEHEVAC
LDITPLGDIGGMSPLCAIGLWTDISARILKLPSFDLLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNVETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTASHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLPTEYALSLVSCKLGKDPNTYFIVGTAMVYPDE
AEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYVKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEFGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDVQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcaactacgtagtgacggcacagaagcccacggccgtcaatagctgcgtcacc
gggcatttcacctcctcggaggacctgaacttgttgattgccaagaacacccgcttggag
atctatgcggtcaccgccgaagggctgcggcccgtcaaggaggtgggcatgtatggcaag
atcgcggtcatggagctcttccggcccaagggggagagcaaggatttactttttattctg
actgcaaaatataatgcctgcatccttgaatacaaacaaagtggagaaagcattgatatt
atcacccgagcccatggcaatgtgcaggatcgtattggtcgtccctcagaaactggtata
attggcataattgacccagagtgccgaatgattggactaagactctatgatggcctcttc
aaagtgattcctctggaacgggaaaataaggaattaaaggcatttaatatccgactggag
gagctacaggtcattgatgtcaagttcctgtacgggtgccaggccccaaccatctgtttt
gtttaccaggatccgcagggccggcatgtcaagacatatgaagtgtctttacgtgagaag
gagtttaacaaaggaccctggaaacaggagaatgttgaggctgaagcctctatggtgatt
gcagtgcctgagccatttggaggggctatcattattggacaagaatccatcacctaccac
aatggtgataaatacctggctatagctccgcctatcatcaagcaaagtacgattgtgtgt
cacaatcgtgtggacccaaacggttcccgttaccttctgggggacatggagggccgccta
ttcatgctgttattggagaaggaggagcagatggatggtggtgtcagtctgaaggatctg
cgcgtggagctgcttggagagacatccattgcagaatgcctgacttacctagacaatggt
gttgtgtttgttggctcacggcttggggactcccagcttgtaaagctcaatgtggacagt
aatgagcaaggctcatatgttgtggccatggaaaccttcaccaaccttggtcccattgtg
gacatgtgcgtggtagaccttgagagacaaggccaagggcagctggttacatgttctggt
gcctttaaggaaggctctttgaggatcatccggaatggaattggaattcacgaacacgcc
agcattgatcttccaggaattaaaggattatggcctttgagatcagactctcaccgtgaa
actgataacaccttagtattgtcctttgtgggacaaactagggttttgatgctgaatggg
gaagaagtagaggaaactgaattgacaggatttgttgatgatcagcaaacatttttctgt
gggaatgtggcccatcaacagctaatccagataacatctggttcagtacgacttgttact
caggagcccaaggcccttgtaagtgaatggagagagccaaacgggaagaacatcagcgtg
gcttcctgcaacagcagtcaagtggtggtggccgtggggagagtgctgtactacctagag
attcaccctcaggaactgaagcagataagttgcacagagatggagcatgaggtggcctgc
ctggatatcaccccgctgggagacatcggcggcatgtcccctctgtgtgccattggcctt
tggactgacatctcagctcgcattctgaaactgccctcattcgacctgctgcacaaggag
atgctgggaggagagatcatcccacgttccatcctgatgaccacctttgagagtagccat
tatctgctttgtgccctgggggatggggctctcttttacttcgggctgaacgttgagaca
ggtttgctgagtgaccggaagaaagtgactctgggaacccagcccactgttttaaggacc
tttcgctccctctccaccaccaacgtatttgcctgctctgaccgcccaactgtgatttac
agcagcaaccacaaactggtcttttccaacgtcaaccttaaggaggtgaactacatgtgc
cctctcaactcagatggctatcctgacagcctggctttagccaacaacagcacattgacc
attggcaccatcgatgaaattcagaagctgcacatccgcactgttcccctttacgagtca
cccaggaagatctgctatcaggaagtatctcagtgttttggtgtgctgtccagtcgcatt
gaagtccaggatgccagtggaggcacaacagctctgaggcccagtgcaagcacccaggcc
ctttccagcagcgtgagctctagtaaattgttctccagcagcacagcctcccacgagaca
tcctttggggaggaggtggaggtgcacaacctgcttatcatagatcaacacacatttgaa
gtgcttcatgctcaccagttcctacccactgagtatgcgctcagcctggtctcctgcaaa
ttgggcaaagaccccaacacgtattttattgtgggcacagccatggtatatcctgatgag
gctgaaccaaaacagggccgtattgtggtgttccactattctgatggtaaattgcagagt
ctggctgagaaagaagtgaaaggggctgtctattccatggtggaattcaatggaaaactc
ttagccagcataaacagcacggtgcggctgtacgagtggacagcggagaaggagctgcgc
acggagtgcaatcattacaacaacatcatggcgctctacgttaagacaaagggtgacttc
atcttagttggcgatctgatgcgctctgttctgttgctcgcctataagcccatggagggg
aactttgaagagattgctcgtgactttaatccaaattggatgagtgcagtggagattttg
gatgatgacaacttccttggggcagaaaatgcctttaacttgtttgtatgccagaaggac
agtgctgccaccactgatgaggagcgccagcatctgcaggagtttggactgtttcatttg
ggcgagtttgtcaatgtcttctgtcacgggtcccttgtcatgcagaacctgggcgaaaca
tccaccccaacgcagggctccgttctctttggcacagtcaatggaatgatcgggctggtg
acttcgctgtcagaaagttggtataatctcctgctggatgtgcagaacaggctgaacaaa
gtcattaagagtgtaggcaagatcgaacactctttctggagatcatttcatacagaacgc
aagacagagccagctacaggatttattgatggagatctaattgaaagctttctggacatc
agccgacccaagatgcaagaggtggtggctaacctacagattgatgatggcagtggcatg
aagcgggaggccacagtggatgacttgatcaagattgtggaggagctcacccgtatccac
tag
DBGET
integrated database retrieval system