KEGG   Varanus komodoensis (Komodo dragon): 123021437
Entry
123021437         CDS       T07701                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
vko  Varanus komodoensis (Komodo dragon)
Pathway
vko03082  ATP-dependent chromatin remodeling
vko03083  Polycomb repressive complex
vko04110  Cell cycle
vko04330  Notch signaling pathway
vko04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:vko00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    123021437 (HDAC2)
   03083 Polycomb repressive complex
    123021437 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    123021437 (HDAC2)
   04350 TGF-beta signaling pathway
    123021437 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    123021437 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vko03036]
    123021437 (HDAC2)
Enzymes [BR:vko01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     123021437 (HDAC2)
Chromosome and associated proteins [BR:vko03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     123021437 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     123021437 (HDAC2)
    BRAF-HDAC complex
     123021437 (HDAC2)
    REST complex
     123021437 (HDAC2)
    SHIP complex
     123021437 (HDAC2)
    MiDAC complex
     123021437 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     123021437 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    123021437 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    123021437 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 123021437
NCBI-ProteinID: XP_044282093
Ensembl: ENSVKKG00000005257
UniProt: A0A8D2KTN3
LinkDB
Position
Unknown
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARLEEDKKETEDKKADIKEEDKSKDSSGEKADTKGA
KSEQLSNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcagggaggtggcaagaagaaagtctgttactactacgacggtgatatt
gggaactattattatggacagggccatccaatgaagcctcacaggattcgcatgacacac
aacttgttgctgaattatggcttgtacagaaaaatggaaatatatcgacctcacaaagct
acagcagaagaaatgaccaaataccacagtgatgagtacatcaaatttcttcgctcaatt
agacctgacaatatgtctgaatatagcaagcagatgcaaagatttaatgttggagaagat
tgtcctgtgtttgatggactgtttgagttctgtcagctgtcaacaggaggctctgtagct
ggagcagtaaaactaaacagacaacagacggatatggctgttaactgggcaggaggactt
catcacgctaagaagtcagaggcttcgggcttctgttatgtcaatgatattgtgcttgcc
attcttgaactactgaaataccaccaaagagtgttgtacattgacattgatatccatcac
ggtgatggtgttgaagaagcattttatacaacagatcgtgttatgacagtatcattccat
aagtatggtgaatattttcctggcacaggagatttgagggacataggtgccggaaaaggc
aaatattatgctgttaactttccaatgagagacggaatagatgatgaatcatatggacag
atatttaaaccaattatatccaaagtcatggaaatgtatcagcctagtgctgtggtactg
cagtgtggggcagattcattgtctggtgacaggttgggatgttttaaccttactgtcaaa
ggccatgcgaaatgtgtagaagttgtgaagactttcaatttacctcttcttatgcttgga
ggaggtggatataccatacgtaatgttgcgcgatgttggacctatgaaactgctgttgcc
ctagattgtgaaattcctaatgaattgccatacaatgactacttcgaatattttggacca
gatttcaaactgcatattagcccatcaaatatgacaaaccagaataccccagaatatatg
gagaagattaaacagcgtttatttgagaatttgcgcatgttgcctcatgctcctggtgtg
cagatgcaagctattcctgaagatgctgttcatgaagatagtggtgatgaagatggtgaa
gatccagacaaacgtatttcaattcgtgcatctgataagcggattgcttgtgatgaagaa
ttttctgactctgaagatgaaggagaaggtggacgcagaaatgttgcagatcataagaaa
ggagcaaagaaagcccgattagaagaagacaaaaaagagacagaagacaaaaaagcagat
attaaagaggaagacaaatccaaggatagcagtggtgaaaaggcagataccaaaggcgca
aagtcagaacagctcagcaatccttga

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