Varanus komodoensis (Komodo dragon): 123021590
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Entry
123021590 CDS
T07701
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123021590 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123021590 (DROSHA)
03009 Ribosome biogenesis [BR:
vko03009
]
123021590 (DROSHA)
03036 Chromosome and associated proteins [BR:
vko03036
]
123021590 (DROSHA)
Enzymes [BR:
vko01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
123021590 (DROSHA)
Messenger RNA biogenesis [BR:
vko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
123021590 (DROSHA)
Ribosome biogenesis [BR:
vko03009
]
Eukaryotic type
90S particles
RNase
123021590 (DROSHA)
Prokaryotic type
rRNA processing factors
123021590 (DROSHA)
Chromosome and associated proteins [BR:
vko03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
123021590 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
123021590
NCBI-ProteinID:
XP_044282388
Ensembl:
ENSVKKG00000000503
UniProt:
A0A8D2J972
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MSFHSGRGCPRSRGGTAVRASTQTFRPQNLRQLHPQQPSMQYQYDQQTATPPTYASPPAT
SYVPPRPDFVPYPPPIPPSPQNTITQCPLRPPFAGHQVRPTFPLPPCFPPAPPPVPNPGT
PPVPANASGQSTFPYMMPPPSMPHPVPPPVMPQQVNYQPVYSPAYSQQAFPPPNFNSYPH
NVNSYQSSSGSPSSCNNSSGNFRHPSQYQVEKTQPERRSPERSKHYDPHRHREHCHGHGD
RHQSASHAERRDRGRSPDRRRQESSRHRSDYIRGRTPPRHRSYEWYRDRQRDRHRHRDSR
RSPSAERTYRKDHKRTGSRSPSQDRKRPRWEEDRERWSENACREKSYTSIKDKEPEEAAV
EKNEDEEEELLKPVWVRCTHSESYYSSDPMDQVGDSTVVGTSRLRDLYEKFEEELGKRQA
KAKAARPPWEPPKTKLDEDVGSSSDSECDSDDDSCSSSSDSEVFDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVRGLELFSSYLFKDILELYDWNLIGPSSENSDASCPRFHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCNKPLVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKL
VQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMH
LDKLIGYTFKDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMR
KKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLAT
YRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNDKDLREVWLHYPLHPLQLQESHTDRQLIETSPVLQKLTEFEDAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMCAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWE
REHQERELEETEDIRK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccattccgggcgagggtgcccccgcagccgaggaggaactgctgtcagagcc
tcaacgcagacttttcggccccagaacctgagacagctgcacccccagcagccgtccatg
caatatcagtatgaccagcaaacggcgacccctcctacctatgccagccctccagctact
agttatgtgcctccaaggccagattttgtcccttatcccccaccaattcccccatcgcca
cagaacaccatcacccagtgtcctctgaggccaccctttgcaggtcaccaggtgaggcca
acctttcctctcccaccttgcttccctccagctccaccccctgtcccaaatcctgggacc
ccccctgttcctgcaaatgcatcggggcaaagcacatttccatatatgatgcctccccca
tccatgccgcaccctgtgccgccaccagtaatgcctcagcaggtcaattatcagccagtg
tactctccagcctattcccagcaggcatttcctcctcctaatttcaatagctacccacac
aatgtcaattcttaccagagcagcagtggcagccccagcagctgtaataacagcagtggc
aattttcggcatccgagtcaatatcaggtagaaaaaacccagccggaaaggaggtctccg
gagaggagcaagcactacgatccgcatcggcaccgggagcactgtcatgggcatggggat
cggcaccagtctgccagtcacgccgagcggcgggatcgagggaggagccccgacaggcgg
cggcaggagagtagccggcaccggtcagattacatcagaggacggacgccgccccgccac
agaagttacgagtggtacagggatcgacagagggaccgacacaggcaccgtgatagtcgc
cgttcaccatctgcagagaggacctatagaaaagatcacaagagaacaggaagccgttca
cccagccaagaccgcaagagacctcgctgggaggaggacagagagcggtggtcagaaaat
gcctgtagagagaagagctacacctccatcaaggacaaggagccagaagaggcagctgtg
gaaaagaatgaagatgaggaggaggagctgctgaagcctgtctgggtgcgctgcacccat
tccgaaagctactattcaagcgatcccatggatcaagtgggagattccactgttgttgga
acaagcagactccgagatctatatgaaaaatttgaagaagagttgggaaagcgacaggct
aaggccaaagctgccaggccaccatgggaacctcccaagaccaaactggatgaagatgta
gggagctccagcgactctgagtgcgactcggatgatgacagctgctccagcagttcagac
tcggaggtctttgacgtcattgcggaaatcaagcgcaagaaggctcacccagatcgtctg
cacgaggagttgtggtacaatgaccctgggcagatgaatgatggtcctctatgcaagtgc
agtgctaaagccaggcggacaggaataagacatgggatctatcccggggaagagcctatt
aaaccttgtcgaccgatgaccaacaatgctggaagattataccactaccgtattacagtg
tcgcctcctacaaacttcttaacagacagaccaactgtaatagagtacgacgaccatgaa
tacatcttcgaagggttttccatgtttgcccatgcgccactcaccaatattcctctgtgt
aaagtaatcagatttaacatcgattatacaattcatttcattgaggagatgatgcccgaa
aatttttgtgtgagagggctggagttgttctcctcctatctgttcaaagacatactagaa
ctctacgattggaacctcataggtccttcctcagaaaacagtgatgcatcctgtccccga
tttcatttcatgccacgtttcgtaaggttccttccagatggagggaaggaggtgctgtct
atgcatcagatcctgctgtatttgttgcgatgcaataagccgttggtgccagaagaagag
attgccaacatgctgcagtgggaggaacttgagtggcagaagtatgcagaagaatgcaaa
gggatgattgttaccagccctggcatgaagcccagctcagtccgtattgatcaactggat
cgcgagcagttcaatccggatgtgattacattccccattattgtccactttggaattcga
cccgctcagctcagttatgctggagacccacagtaccaaaagctctggaagagttatgtc
aaattgcgccacctgctggctaacagtcccaaagtgaaacaagcagataaacagaaactc
gtgcagagagaagaagccctgcagaagatcaggcagaaaaataccatgagacgggaagtg
accgttgagctgagcagtcaaggtttttggaaaactggcattcgttccgatgtctgtcag
cacgccatgatgcttcctgtcctgacccaccacatccgctaccaccagtgcctgatgcat
ttggataaactgatcggctacacttttaaagaccggtgtttgttgcagcttgccatgact
catccaagccatcacttaaactttgggatgaatccagaccatgcaaggaattccttgtca
aattgtggaatccggcagcccaaatacggagatcggaaggtccatcatatgcacatgagg
aaaaaaggcataaacactctgatcaatattatgtcacgccttgggcaagatgatcctgct
ccttccagaattaaccataatgaacgcctggaatttttgggagatgctgtggttgaattt
ttaactagtgttcatttgtactacctatttcccagcttagaggaaggcgggctagcaacc
taccgcactgccatcgttcagaaccagcatcttgccatgctggccaagaagctggaactg
gatcgatttatgctttatgctcatgggcctgatctgtgccgtgaatcagatttgcgccat
gcaatggccaactgctttgaagcgctaataggggcagtttacctggagggaagtcttgaa
gaagccaaacaactgtttggacgcctgctctttaatgacaaggacctgcgggaagtatgg
cttcattatccactacaccctctccaactgcaagaatcccatactgaccgacagctgatt
gagacgtctcctgtccttcagaaactgactgagtttgaagatgccattggagtcattttt
actcatgttcgacttctggcccgggcctttactttgaggacagtgggatttaaccatctg
actctgggccacaatcagaggatggagttcttgggcgattctataatgcagctggtggcc
acagagtatttattcatacatttcccagatcaccatgaaggccacctgacgttgttacgg
agctccctggtcaacaacaggacacaggccaaagtggcagaagaactgggcatgcaggag
ttcgccatcacaaatgacaagaccaagcggccagtagctttgcggacaaagacactagca
gatcttttggaatcttttattgctgctctgtatatagataaggatctggaatatgtccac
accttcatgaacgtctgcttttttccacgactgaaggaattcattttaaaccaggactgg
aacgatccaaaatctcagctccagcaatgctgtttaactctccgaacggaagggaaggag
cctgacattcctctgtataagactctgcaaaccgtcggaccttctcatgccagaacgtac
actgtagctgtttatttcaaaggtgaaagaataggatgcggcaaaggaccaagcattcag
caagcggagatgtgtgcagcaatggatgcactggaaaaatataactttcctcagatggcc
catcagaaacggttcattgaacggaagtacagacaagagcttaaagaaatgaggtgggaa
agagagcatcaggagagagaactggaggagacggaagacataaggaaataa
DBGET
integrated database retrieval system
