Varanus komodoensis (Komodo dragon): 123021826
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Entry
123021826 CDS
T07701
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vko03400
]
123021826 (PMS1)
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
123021826 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
IL5
Motif
Other DBs
NCBI-GeneID:
123021826
NCBI-ProteinID:
XP_044282937
Ensembl:
ENSVKKG00000002922
UniProt:
A0A8D2J3K0
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MKQLPPDTVRLLSSSQVITSVVSVVKELIENSLDANATSVDVKLEGYGFDKIEVRDNGDG
IKAADVPVMAMKHYTSKISSSEDLENLTMYGFRGEALGSICSTSEVLITTKTAADDFSTQ
YSLDKSGHVISQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTDKKCKEEIKKIQKLLMAYG
IIKPELRIIFIHNKTVIWQKTRVSDHKMAFMAVVGTAVMGSMVPFQRCGQDPEVLISGFL
PKPDSDGCLTSHSNSERSFIFVNYRPVYQKEILKLAQRYYNHKLHRDANRLYPVLFINIT
VPPFALDVNVTPDKSQVLLHNKESICLAIEDILTSVYGPLTEATSCETDITDAILEDIFA
NGMEQMISPINEMESCSDINPHTCMPLASLNKDVQNGETEKNADISLKNQTLCHNSSGDL
PGEIEISSNEMVGYDRFQDGTLNNFLSQDEQSMSKEVFNLDSRTFINPYSKNSIKGDLRN
DSFQEAEKREGAIIPKDSSEVTADKWSMGNAFKNSREENLEPIQILIPGMKEARPQKKND
VDNQQKLQEENNQSIKASNVVNNKVGQITAYDLIRNQTIRKPMSAFALFTQDHRLGLLTE
NIKISTEELMLKLEEMWKMLSEEAKKKYEEKAERDLERYNRQSEDAMIQSLQKSTKGKER
RHKVRLKDSLSQQEKLDKLFHSQAEKKHNNRQAIKIVHVPFSMDTLKHKLDFLEQKESDK
DERCLLQLLNFPEAWIIASEKEVTVLNPYRVEEALLFKRLLENHKLPTEQLDKPIALTDS
LFSGCHYMEVLCNMTKDSVRFDGSCYLLDSRLVANGFKIKMIPGASATEHQLEIEGMTKC
VPYYGVSDLKEILNAVINNNAKEVYECRPLKVVNYLEGEAVRLSRQLPLYLSKEDVQDTI
CRMEKQLGNQHKGCVHGRPFIHYLTDIPQKN
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaattaccaccagatactgttcgacttctttcaagttcacaggtgatcacatca
gttgtcagtgtggttaaagaactgatagagaattctttggatgccaatgcgaccagtgtt
gatgttaagttggaaggctacggttttgataagattgaggtgcgagacaacggtgatgga
atcaaggcagctgatgttcctgtcatggcaatgaaacactacacgtcaaaaataagctct
tctgaagaccttgaaaatttgacaatgtatggttttcgtggtgaagctttgggatcaatc
tgtagtacatcggaggttctgattacaacaaagacagcggctgatgattttagcacccag
tacagtttggataaaagtggtcatgtaatttctcaaaagccatctcatcttggacaaggt
acaactgtaacggtactgaagctgttcaagaatctgcctgtaagaaaacagttttattca
acggataaaaaatgtaaggaagaaattaaaaaaatccagaaacttctgatggcatatggt
attataaaaccagaactgaggataatatttatacataacaagacagtaatatggcaaaag
accagggtatcagatcacaaaatggctttcatggcagttgtgggaactgctgttatgggc
agcatggtgccatttcaacgctgtggtcaagatcctgaggtacttatcagtggcttcctt
ccaaagcctgattcagatggttgtttgacaagtcattcaaattcagagagaagcttcatc
tttgttaactatcgaccagtatatcaaaaggaaattctgaagctggctcaacggtactat
aatcacaagttgcacagggatgctaatcgtttgtatcctgttttgttcatcaatattact
gttcctccatttgctttggatgttaacgtgacaccagataaatctcaagtattgctgcat
aataaggagtctatatgtcttgctattgaagacatcttgacatcagtgtatggacctcta
actgaggctacatcttgtgaaactgacattacagatgctatcttggaagacatctttgct
aatggaatggaacaaatgattagtcctattaatgaaatggaatcctgtagtgacataaat
cctcacacatgtatgccattggcttcactcaataaagatgttcaaaatggtgaaacagaa
aaaaatgcagacatcagtttgaagaaccaaacactgtgtcataattcctctggtgatctt
cctggcgaaatagaaatctctagcaatgagatggttgggtatgatagatttcaagatggc
acactaaataattttctatctcaggacgaacagagtatgtctaaggaagtatttaacctt
gacagcagaaccttcataaacccttattctaaaaatagcatcaagggagatttgagaaat
gacagttttcaagaagcagaaaaaagagaaggagccataatcccaaaagattcttcagaa
gtcactgctgataaatggagtatgggaaatgcgtttaaaaattccagagaagagaacctg
gagcctattcagatattgattcctggaatgaaagaagcaagaccccaaaagaaaaatgat
gtagataaccaacagaaacttcaagaggaaaataatcaaagtattaaagcatcaaatgta
gtaaacaataaagtgggacaaattacggcctatgatttaattagaaatcagacaataagg
aaacctatgtcagcatttgccctttttactcaagaccatcgtcttggattgttgactgaa
aatatcaaaataagtacagaagaactaatgctaaaactagaagaaatgtggaaaatgctg
agtgaagaggcaaaaaagaagtatgaagagaaagctgagagagatctggagcggtacaac
aggcaaagcgaagacgctatgattcagagtttgcagaaatcaaccaaaggaaaagaaaga
agacacaaggtcagactgaaagattctctatctcaacaggaaaaacttgataaacttttt
cattctcaagcagaaaagaaacacaataatcgccaagcaataaaaattgtacatgtcccc
ttctcaatggatacattgaaacataaacttgatttccttgaacaaaaagagtcagacaaa
gatgaacgttgcctgcttcaacttctgaattttcctgaagcatggataattgcttctgag
aaagaggttacggtgttgaatccatatcgggtagaagaagccctgctatttaaaagactt
cttgaaaatcataaactgccaacagagcaactggacaaaccaattgcactaactgacagt
ctttttagtggctgtcattacatggaagttctttgcaatatgaccaaagacagtgtaaga
tttgatggatcgtgctatttgttggattcgagacttgtagcaaatggatttaagataaag
atgattccaggtgcttcagctacagaacatcaattggaaatagaagggatgaccaaatgt
gtaccgtactatggtgtatctgatttgaaagaaatattgaatgctgtgataaataataat
gcaaaggaagtctatgagtgtagacctcttaaagtggtgaactacttggagggagaagca
gtgcgactttcccggcagctacctttgtatttatcaaaggaagatgtgcaggacaccata
tgcagaatggagaagcaactgggaaatcaacataaaggctgtgttcatggtcgtccattt
attcattatttaactgatattccacagaagaactag
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